Gene Dvul_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0247 
Symbol 
ID4662907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp305103 
End bp305879 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content45% 
IMG OID639818444 
Productextracellular solute-binding protein 
Protein accessionYP_965698 
Protein GI120601298 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000342463 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAT CACTCACACG CATTTTGGCA ATGTCGGCAT GTATTACCCT GCTGGCACAT 
AACAATGCAA AAGCAGGCGC CGACCTCTAT GTCATGGCTG AAGAGTCGAC GCCTCCATAC
GCCTTCGTTG AACATGGCAT AAAAAAGGGG ATTGACCACG ACATCATCGT CGAAGCTGCG
AAAAGAATGA ACATCCGTGT TGAAATCGAC ATGGTTCCAT GGATACGCAT GTATAAATCC
ATCGAGACAG GCGTTTGTGA TGCAGGGTCT GCATTCTTCC ATGTCAAGGA ACGGGAGTCA
TTTGCGATAT TTACAAATAC TCCTCTCCAT CATAGCACAT ATTCTGTATT CATCAGAAAG
GACAGCAAGC TTGAATACTC ATCGATTGAA AGTCTTTACG GCAAAACGAT CGGCGTATCC
AGAGGATACA GGCTGAACAA CGACTTCAAG GAGGCTGTAG ACAGAGGCTT CATTCAAATA
GAGGAGACGA ACAACATCTC TATGAACATA AGAAAAGTCA TGGCGGGGCG ACTAGACTGC
ATGGTGGCAA ATTACGATGT CACGATGCTT GAACTTTCCC GTGCTGGTCT TCGTGGCCAG
CTTATAGCCT TGAACCCACC ATTACTTGAA AGAAAGCCGC TCCATTTCGT TTTTTCTAAA
GCAGGCAGGT ATGGCAACAA TAAAGAGTTC ATAGCGAAAT TCGAGTCGAC GCTCGATGCC
ATGAAAAACG ACGGAACATT CAAAAGAATA TACGATCGAT ACTACGCCAA ACAATGA
 
Protein sequence
MLQSLTRILA MSACITLLAH NNAKAGADLY VMAEESTPPY AFVEHGIKKG IDHDIIVEAA 
KRMNIRVEID MVPWIRMYKS IETGVCDAGS AFFHVKERES FAIFTNTPLH HSTYSVFIRK
DSKLEYSSIE SLYGKTIGVS RGYRLNNDFK EAVDRGFIQI EETNNISMNI RKVMAGRLDC
MVANYDVTML ELSRAGLRGQ LIALNPPLLE RKPLHFVFSK AGRYGNNKEF IAKFESTLDA
MKNDGTFKRI YDRYYAKQ