Gene Dvul_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0057 
Symbol 
ID4663672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp71748 
End bp73529 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content64% 
IMG OID639818250 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_965508 
Protein GI120601108 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC TCCCCACTCT CCAGAAGAAC ATACGGAGGG CCTTCGGACG GCTGATGCTC 
CTGTTCGGTT GCCTCGGGGC GCTGCTCGTC CTGGCGTTCT TCATCGCCGG ACGACTGCCT
ACCCTGCTCG TGCGCATGAA CTACGACTCC ATCGCCTATG TGCGTCAGAT GGAGGAGGCC
GTTTTTGCGC TGCGGCTGCC GGAACAGTAC GTACAGCAAG GGCATCAGGG GCGTGAGGCC
GCCTTCGACG AGGCATTGGC GCGTGCTTCG GCCAATGTGA CGGAACCTGA TGAACCGCAG
GCCATCGAGG CCGTGCGCAA CGCGTGGGAC CAGTTCAGGG AATCCCGCGA TGACGAGAGT
TACGCTCTCC TGCATACGGC ACTGGTGCAT CTCGTCGATG TCAACGAGCG CGGCATGTTC
CGAAGGCTCG ACCGGAGCAA CCTGTACCGG AACCTGACAC TGGCTGGCGC TGTGGTCGTC
TTTCTTGCCG GGACCCTGTG GGCGATGTTC CTTGCGGACG CCGTCTCGAT GCGGCTGTCG
CACCCGTTAC GGCGCATGGC CGAACTGCTC AAGGACAGGC CCCCCCTCGG CACCCGGCTT
CATCTGCCTG CCCCGCAGAC GCTCGAGGTG CGCATCCTCT TCGACGAGTT CGAGCGCCAA
TGGACGCGGC TTGGCGAACT CGACGCCGTC AACCTGAACC GCCTGCTGCG CGAGAAGCGC
AAGCTGGAGG TCATCCTCGA ATCTGCCGAC GACGCCATCA TCGTCATGGA CAACACCGGT
TGTGTGGCGC ATGTCAGCCG CAGCATGACC ACTCTCCTCG GCATGCCGGA GCACGAACTG
CTGGGGCAGC CGTGGCATGA CCTTTCGACC ATGGACGAGA ACTATCTCGC CCTGAGGGGC
ATCCTGCGGG ATGACCTCGT GGGCAAGGGC GAGGTCGAAC TGACCTGCAA CGGCGAACCG
CGCGTGTTCA TCGTCCGCCG CCGTTCGCTG CATGACGGCG TGCGAACCGA CGGCGGTCAG
GTGTTCCTTC TGGGTGACGT GACGGAGAAG AAAAGACGCG AGAGCCTGCG GTCGGAGATG
ATGGACTGGA TATCGCACGA ACTGAAGACC CCGGTGCAGT CGCTGGGGCT TGCCGCTGAA
CTCCTGGGCA GGCAGGACAT GCAGGACGAT GACATGCGCC TGCTGGTGGA CACCATACGG
GAAGACGCCG TGCGTCTGCG GACGGTGTCG AGGCAGTTCA TGGACATCGC CCGCATGCGC
GTCGACATGC TGCGCCTTGA AAGACGCGAT GTCGACATGG CACAGCGCCT CGGCGCATGG
CTCACACCTT TCAGACTGCT CGCTCGAGAG AAGGGCGTGG GCATGGAGGT CGACGTGCGG
CAGGCGCCTG CCGTCGTCTC GGTCGATGAA GACCGTTTCT CGTGGGTCGT CTCCAACCTC
GTTGCGAATT CCCTGCAGGC GTCACCCAGG AACACGACGC TCACGGTACG GCTGACCGAA
GCCTCCGGAG ACCTCACCCT GACCGTCGAA GACGAAGGGC CCGGAGTGCC GCGCGAACTC
GAAGAACGCA TGTTCGAACC CTACTCGCAT GGGAGGGCCG CAGGAACGAA GCTGGGCCTC
GTGGGGCTGG GGCTTGCCAT CTCGCGCACC ATCGTCGAGG CGCATGGCGG ACGTCTGGCC
TATGAACGAC GCGACGGGCG CAGTCTCTTC ACCGTCCATA TCCCGCAAGG GACACCCCAT
GGGGCGACGC TTGCGACCAG CCTGCAACAG GAGGGCGCAT GA
 
Protein sequence
MTVLPTLQKN IRRAFGRLML LFGCLGALLV LAFFIAGRLP TLLVRMNYDS IAYVRQMEEA 
VFALRLPEQY VQQGHQGREA AFDEALARAS ANVTEPDEPQ AIEAVRNAWD QFRESRDDES
YALLHTALVH LVDVNERGMF RRLDRSNLYR NLTLAGAVVV FLAGTLWAMF LADAVSMRLS
HPLRRMAELL KDRPPLGTRL HLPAPQTLEV RILFDEFERQ WTRLGELDAV NLNRLLREKR
KLEVILESAD DAIIVMDNTG CVAHVSRSMT TLLGMPEHEL LGQPWHDLST MDENYLALRG
ILRDDLVGKG EVELTCNGEP RVFIVRRRSL HDGVRTDGGQ VFLLGDVTEK KRRESLRSEM
MDWISHELKT PVQSLGLAAE LLGRQDMQDD DMRLLVDTIR EDAVRLRTVS RQFMDIARMR
VDMLRLERRD VDMAQRLGAW LTPFRLLARE KGVGMEVDVR QAPAVVSVDE DRFSWVVSNL
VANSLQASPR NTTLTVRLTE ASGDLTLTVE DEGPGVPREL EERMFEPYSH GRAAGTKLGL
VGLGLAISRT IVEAHGGRLA YERRDGRSLF TVHIPQGTPH GATLATSLQQ EGA