Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0753 |
Symbol | |
ID | 4655658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 851952 |
End bp | 853670 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639810712 |
Product | pilus (MSHA type) biogenesis protein MshL |
Protein accession | YP_958037 |
Protein GI | 120553686 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.22971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGACA AGCGGACACC AATGAATGCA TTCAGACCGA AGGCCCAGAC GGCGCTCGTA GTTGCGCTCT CCCTATTCAT GGCGGCCTGT AGCAACAATC CGTTAATGCG CACCTCGGCG GCGACCTCTT CCGACGTGGC CGACGAAATC GACCGAACCC TGGAACAAGC GGAACAGAGT CAGCGGGCAG CCAGTAACGT GAGTGCGGTG CCTGCGCCAT CGGCTGCCGA TATCAGCAGC CAGCTTTTGC CGCCTCTGAG TAGCAGCCCG CAACAGGATG AGCGCTTCGA TGTGAACGCC TCGGAAGTTC CGGCCAGTAG TTTTTTTGAG GCACTGGTTG CCGGCACCCG CTATAACGTG GTGGTTCGCC CGGATGTGGC CACGACGGTC AGTCTTCGCC TGAGCGATGT GACCGTTCCA GAAGTCATGG ACATAGCGGC AGATCTGTAT GGCCTTGATA TCACCCGTAG CGGTCGGCTA TATCGGGTGG CGGCCGATCA GGTTCAGACC CGCCTGTTCC CCATCGATTA TCTGCACTTC AAACGCCGTG GCGGCTCGGA AACCCGTGTT AGTTCCGGGC AGGTCAGCAG CTCCCGAAGC AATAGAGAGG GGGCTGGCAG CAACGATAAC AATGAAGACA ATGAAACGCG CAATCTGGTC GGTACCACGA TATCGACTCA GACCGAATCG GATTTCTGGC GTGATATCCG CGACGCCCTG AACATGATTG TGGGCGGTGA TAACGGGCAG GTTGTGGTAA ACCCCGGGGC CGGGCTGGTT ATGGTCCGGG CTGGTGCCGA TGATCTGAGG CTGGTGGAAA ACTATTTGCG CAAGACTGAG CTGATTATGC AGCGCCAGGT TGTGCTGGAA GCCAAGATTC TGGAAGTGGG GCTAAACGAG GGGTACCAGC AGGGTATCGA CTGGAATGAT GTACAGAGCT CTGCGGGGCG GGCTGACTAC TTCACCAGCC AGTCACTTGG TGGTCAGCAA ATTCGGACTC CGGACATCGG CGGGCTTTTC TCGGCAACGG TCAGTGCCGG GGATTTCACC GGGTTGATTG AACTGCTTGG CCAGCAGGGC AATGTGCAGA TCCTGTCGAG CCCGAGAATT TCCACGGTTA ACAATCAAAA GGCCGTGATC AAAGTCGGCA CCGATGAGTT CTTCGTCACC GACATTGATT TTGATGACAA CAATTCTGCT GTTACCGCCA CCGACAGCAC ATCAACCTCC GTCGAGCTGA CGCCGTTCTT TTCCGGCATC TCTCTGGATG TGACACCTCA GATCGCTGAG GACGGCGCCA TCACCCTGCA TGTGCATCCA TCCGTGAGCG AAGTGGCGGA TCAGGAAAAG GTGATTACCA TCGGGGAACG GGATGTCACC CTGCCATTGG CCCGCAGCAC CGTTCGCGAA ACCGATAGCG TCATCCGGGC CGAAAGTGGC CAGATTGTGG TGATTGGCGG TCTGATCCAG AACAGCAGCG AAGACAACAA TTCAGCGGTG CCTTTCTTCA GTGAGATTCC ACTGCTGGGT GAACTGTTCA AGCAACGCAA TTTTGAATCC CGGAAGAGCG AACTGGTTAT TCTGTTGCGT CCGGTCGTCG CCAATGCCGG CCAGATGCAG GCTGACGTCA GTGCCTCCCG TGAGCGCATG AATGTATTAC GGGAGCTGCT GAACTCGTCT GAATCCGTCA AGCCACAACC CGAGACTGCA CCGCGCTGA
|
Protein sequence | MKDKRTPMNA FRPKAQTALV VALSLFMAAC SNNPLMRTSA ATSSDVADEI DRTLEQAEQS QRAASNVSAV PAPSAADISS QLLPPLSSSP QQDERFDVNA SEVPASSFFE ALVAGTRYNV VVRPDVATTV SLRLSDVTVP EVMDIAADLY GLDITRSGRL YRVAADQVQT RLFPIDYLHF KRRGGSETRV SSGQVSSSRS NREGAGSNDN NEDNETRNLV GTTISTQTES DFWRDIRDAL NMIVGGDNGQ VVVNPGAGLV MVRAGADDLR LVENYLRKTE LIMQRQVVLE AKILEVGLNE GYQQGIDWND VQSSAGRADY FTSQSLGGQQ IRTPDIGGLF SATVSAGDFT GLIELLGQQG NVQILSSPRI STVNNQKAVI KVGTDEFFVT DIDFDDNNSA VTATDSTSTS VELTPFFSGI SLDVTPQIAE DGAITLHVHP SVSEVADQEK VITIGERDVT LPLARSTVRE TDSVIRAESG QIVVIGGLIQ NSSEDNNSAV PFFSEIPLLG ELFKQRNFES RKSELVILLR PVVANAGQMQ ADVSASRERM NVLRELLNSS ESVKPQPETA PR
|
| |