Gene Mvan_5685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5685 
Symbol 
ID4646206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6073689 
End bp6074963 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content71% 
IMG OID639809161 
ProductDNA polymerase IV 
Protein accessionYP_956456 
Protein GI120406627 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00273553 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGTGT CCGCCGCTCG CGTTCCACAG CCGGCTCAGC CTGCTCAGCC GGCTCCGGTT 
TCATTGCCGG CTCAGCCCGC GGCCATCCTG CATGCCGACC TCGACTCGTT CTACGCCTCG
GTCGAGCAGC GCGACGACCC GTCGCTGCGC GGCCGGCCGG TGATCGTCGG CGGCGGCGTG
GTGCTGGCCG CCAGCTACGA GGCGAAGGCA TACGGGGTGC GCACGGCGAT GGGCGGCCGT
CAGGCACGTG CCCTGTGTCC GCAGGCGATC GTCGTCCCGC CACGAATGTC GGCATACTCG
TCGGCCAGCG CGGCGGTGTT CGAGGTGTTC CACGACACCA CCCCCGTCGT CGAGCCGCTC
TCGGTGGACG AGGCATTCCT CGACGTCTCC GGTCTCCGGC GGGTCTCGGG CACCCCGGTG
CAGATCGGGG CCCGGCTACG CGAGCGGGTT CGCGACGAGG TCGGACTGCC GATCACCGTC
GGCATCGCAC GCACCAAGTT CCTCGCCAAG GTCGCCAGCC AGCAGGCCAA GCCCGATGGC
TTGCTCCTGG TACCGCCCGA TCGGGAGCTG GCATTCCTGC ACCCGCTGCC GGTGCGCCGG
CTGTGGGGGG TGGGCGCCAA GACCGCCGAC AAACTGCGCG TCCACGGCAT CGAGACGGTC
GCCGACGTGG CGGAGCTCAG CGAGAGCACG CTGGGATCCC TCGTCGGCGG GGCGATGGGA
CGGCAGCTGT TCGCGTTGTC GCACAACGTG GATAGCCGCC GAGTCGTGAC CGGGCATCGT
CGGCGGTCGG TCGGCGCGCA ACGCGCGCTC GGGCGGGCAG GCAGCACGAT GTCGGCGGCC
GAGGTCGATG CCGTCGTCGT CAACCTCATC GACCGGATCA CCCGTCGGAT GCGCAAGGCC
GGGCGTTCCG GGCGAACCGT CGTGCTGCGG TTGAGGTTCG ACGACTTCGC CCGGGCGACC
CGGTCCCACA CCATGCCGAG GGCGACGGCG TCCACCGACG CCATCCTGGC GGCCGCGCGT
GGCCTGGTCG GGGCGGCGTC GCCGCTGATC GCCGAGCGCG GTCTCACCCT CATCGGCTTC
GCGGTGTGCA ACATCGACCG TGAGGGAGCC CAGCAGCTTG AACTGCCGTT CGGTAGGGAC
CACGGAGCCG GGGACTCGCT GACCATCGAC CTGGCGATCG ACAAGGTGCG TGGGCGCTAC
GGCAATGCCG CGGTAACCCG GGGCGTACTG CTGGGCCGCG ACCCCGGATT GGAGATGCCG
ATGCTGCCCG ACTGA
 
Protein sequence
MFVSAARVPQ PAQPAQPAPV SLPAQPAAIL HADLDSFYAS VEQRDDPSLR GRPVIVGGGV 
VLAASYEAKA YGVRTAMGGR QARALCPQAI VVPPRMSAYS SASAAVFEVF HDTTPVVEPL
SVDEAFLDVS GLRRVSGTPV QIGARLRERV RDEVGLPITV GIARTKFLAK VASQQAKPDG
LLLVPPDREL AFLHPLPVRR LWGVGAKTAD KLRVHGIETV ADVAELSEST LGSLVGGAMG
RQLFALSHNV DSRRVVTGHR RRSVGAQRAL GRAGSTMSAA EVDAVVVNLI DRITRRMRKA
GRSGRTVVLR LRFDDFARAT RSHTMPRATA STDAILAAAR GLVGAASPLI AERGLTLIGF
AVCNIDREGA QQLELPFGRD HGAGDSLTID LAIDKVRGRY GNAAVTRGVL LGRDPGLEMP
MLPD