Gene Mvan_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2476 
SymbolnhaA 
ID4648116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2627804 
End bp2629198 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID639805959 
ProductpH-dependent sodium/proton antiporter 
Protein accessionYP_953295 
Protein GI120403466 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.946252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.639371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCCGGG AAGACTGGTC GGCGTCTATT CGCCGACGAC CAGTAAGGCA GGCCGTGACA 
TCCGATCCCC GCGCACGACG CATCCGGCGG GCACTTCTCG CCCGCGGCTC GTGGTCCGAG
ACCAACAGGG TCACCGAGAT CCTGCGCAAG GAAACCGTCG GCGGCATCAT TCTCCTGGTG
GCCGCCGCCG CGGCGCTGAT CTGGGCCAAC TCACCGTGGT CGCAAAGCTA CTTCGCGCTG
CGCGACTTCG AACTCGGAGG TGAATGGCTC GGTCTGCACC TGAACCTCAC CCTCGGGGCC
TGGGCCGCCG ACGGACTGCT GGCGATCTTC TTCCTCGTGG TCGGCCTGGA GCTCAAGCGC
GAATTCGTCG CAGGAGACCT TCGGGATCCG AGTCGGGCGG CGCTGCCGAT CGCCGCGGCC
GTCGGTGGCA TGGTGGTGCC CGCGCTGATC TTCGTGCTGG TGAATCTGAA CACCGGGGAC
GGCGCGCTGC GCGGTTGGGC GATCCCCACC GCGACCGACA TCGCGTTCGC GGTGGCGGTG
CTCGCGGTCA TCTCCACGCA CCTGCCGTCG GCGCTGCGCA CCTTCCTGTT GACCCTGGCC
GTCGTCGACG ACCTGCTGGC GATCACCGTG ATCGCGGTGT TCTACACCGA CGACATCAAG
GCGTGGGCGC TTGCGCTGGC CGTGGTTCCG CTGGCGCTGT TCACGGTGTG CGCGCAGCGC
GGTGTGCAGA AATGGTGGCT GCTCGTCCCG TTGTCGGTCG CGACCTGGGT GCTGGTGCAC
GAGTCGGGAG TGCACGCGAC CGTGGCGGGC GTGCTGCTGG GCTTCGCGGT TCCGGTGCAC
CGATCGGCGA CCCGTCGGGG ACAGCAGGTC GACCACGCGG AGCGGGTGGG TATGGCCGAG
TACTTCGAGC ACCGGGTGCG CCCGATATCG GCAGGCATCG CGATACCGGT GTTCGCCTTC
TTCGCCGCCG GGGTCAGCAT CGGTGGTCTC AGCGGACTGT CCCGTGCGCT TGGCGACCCG
ATCACCCTCG GCATCGTGCT CGGTCTGGTC GCCGGTAAAC CCATCGGGAT TCTCGTCACC
ACGCGTGTGC TCTCGGCGGT GACACGGGCC AGCCTCGACT CCTCATTGCG GTGGGTCGAC
GTGTTGGGCA TGTCCATGCT CGCCGGAATC GGGTTCACCG TGTCGCTGCT GATCGGCGAT
CTGGCGTTCG GGATGGGATC TGAACGTGAC GAATTTGTGA AGATCGGTGT GTTGTCCGGG
TCACTGCTGG CGGCGTCGCT GGCGGCGATC GTGCTGCTCA CCAGAAACCG TGCCTACCGG
CGCATTCACC GAGAAGAGAC GGCCGACGAC GACCACGACG GAGTGCCCGA TGTGTACCAG
ACTCGACAGG ACTGA
 
Protein sequence
MCREDWSASI RRRPVRQAVT SDPRARRIRR ALLARGSWSE TNRVTEILRK ETVGGIILLV 
AAAAALIWAN SPWSQSYFAL RDFELGGEWL GLHLNLTLGA WAADGLLAIF FLVVGLELKR
EFVAGDLRDP SRAALPIAAA VGGMVVPALI FVLVNLNTGD GALRGWAIPT ATDIAFAVAV
LAVISTHLPS ALRTFLLTLA VVDDLLAITV IAVFYTDDIK AWALALAVVP LALFTVCAQR
GVQKWWLLVP LSVATWVLVH ESGVHATVAG VLLGFAVPVH RSATRRGQQV DHAERVGMAE
YFEHRVRPIS AGIAIPVFAF FAAGVSIGGL SGLSRALGDP ITLGIVLGLV AGKPIGILVT
TRVLSAVTRA SLDSSLRWVD VLGMSMLAGI GFTVSLLIGD LAFGMGSERD EFVKIGVLSG
SLLAASLAAI VLLTRNRAYR RIHREETADD DHDGVPDVYQ TRQD