| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3597 |
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| Symbol | |
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| ID | 4625147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4410413 |
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| End bp | 4412500 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639798713 |
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| Product | type III secretion FHIPEP protein |
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| Protein accession | YP_944879 |
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| Protein GI | 119947199 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.69729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGT TAAAAAAGTT TAAAAACATT AAATTAAGCC TAGCGATTCC AGCCACTCTG
TTGATGATAT TGGCAATGGT GATGCTGCCT TTACCGCCTT TTTTACTGGA TATATTTTTC
ACTCTGAATA TTGTTCTGGC GATTATCGTA TTACTGGTCA GTACCACTAC CAAAAGAGTA
TTGGATTTTT CTGTTTTTCC AACCCTGTTA TTAATCGCAA CACTGATGCG CTTAACCCTG
AATGTTGCCT CAACACGTAT CGTATTAATT GAGGGTCATA AGGGAGGCAA TGCCGCAGGT
GATGTTATCC AGGCTTTTGG TGATGTCGTG ATCGGTGGTA ACTATGTGGT CGGTATGGTG
GTTTTCATTA TTTTAATGAT TATTAACTTT GTGGTTATTA CCAAGGGTGG CGAGCGTATT
TCGGAAGTAT CCGCACGTTT TACTCTAGAT GCTCTACCGG GTAAACAGAT GGCGATTGAT
GCTGACTTAA ATGCAGGATT GATCAATCAG GAACAAGCCA AAACACGCCG TCAGGAAACC
GGTGATGAGG CGGAATTTTA TGGCTCAATG GATGGCGCAA GTAAATTTGT CCGAGGCGAC
GCCATCGCTG GCCTGCTGAT TCTTTTTATC AATTTAATCG GCGGCGTGCT GATTGGTATT
TTCTCCCATG ATATGAGCGC TGCAGAATCC TTTCAAACAT TTGCTTTGCT GACCATAGGT
GACGGTATTG TTGCGCAGAT ACCTTCTCTG TTATTAGCCA CCTCGGCAGC GGTGATTGTT
ACCCGGGTCA GTAATTCCGA CAGCGATATT TCACAGACCA TTAAAAAACA AATCCTGTCT
ACACCCAGTG TTCTTTATGC CAGTGCAGGG GTCATGACGA TTATCGGCCT GGTGCCGAAT
ATGCCGCATT TACCCTTCTT AATATTTGCT GCTCTTTTGG GTTTTGTCGG CTGGCAGCAA
AGCAAAATTC AGGAGGAGTC TCAATTAGAA GAGGTGAATC AGTCGGTCAA CCCGTTGCAA
AGCCCTTCGG AGGAGGTACT TGATTGGCAG GTAGTAACAG ATATTGAGCC GATTACCCTG
ACACTCGGCT TTAAACTGGT TTCGCTGCTG AACATTGAAA ATGGTGCACC ACTGCTTAAA
AGCATTAAAG GAACACGAAA ATCTCTATCT GAGGAAGTCG GATTTTTAAT ACCTGAGGTC
ACCATTCGCG ATAATTTATC CCTCAAACCT GACGAATATG TTATTTTTAT TGATGGTGAA
GAGATGGAAA GAGGCACTGT CAAAACGGGC TATTTAATGG CAGTTTCATC CGATGACAGT
TTTGGTTCAA TAGATGGCAT TATCGGACAA GATCCCGCTT ATTTGATGCC CGCACTGTGG
ATCACGCCGG AGAATAAGTC ACTTGCGATT AATTACGGTT ATCAGGTGAT TAGTTTAGCC
GACGTAATTG CTACGCATAT CAACAAGGTA TTAAGCGCGA ATCTGGCCAG TATTTTTAAC
TATGACGATA TAAAAGCAAT GAACGATAAA CTTGGACTGA TTCACCCGCA ACTGTCCGAA
TCATTGAGTG CTGCCGTCAC ACCGGGGTTA CAGTTACAAA TCATTAAAAA TCTGCTTATT
GATCAAGTCC CGGTTAAAAA TAAAAAGGTC ATTGCCAATA CTATTCTTGA TAGCATCAAT
AAAACCAAAG ACCCGATTCT TATTTCATCG GATGTTCGCG CAGCGTTGAA ACGCACCATC
TTAAGTCTAA TCAGTCCGGA CAGTAAAACC CTTGACCTGT TTGTCTTAAG CAGTGAATTA
GATAATATTC TGCGTAACGC AATCGCTCAG GTTCAGACGC AAAATCCACA GACCAGTTTG
GATGAAGTCC CTATCGATCC TAATTTGTTA GCCCAACTAC AGCAAAATTT ACCTAATATC
ACTCAGCAAA TGATGCAGCA GGGACTGGTA CCTATTTTAT TGGTATCACC AACGGTAAGA
CCTATGATGA GTAAATTTTC CCGCGCATTT TCACGCGATT TAATTGTTTT ATCATTTAAT
GAGATTGCCG ATGATTATCA AATTAACGCC ATTGGCAATT TAGATTAA
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| Protein sequence | MELLKKFKNI KLSLAIPATL LMILAMVMLP LPPFLLDIFF TLNIVLAIIV LLVSTTTKRV
LDFSVFPTLL LIATLMRLTL NVASTRIVLI EGHKGGNAAG DVIQAFGDVV IGGNYVVGMV
VFIILMIINF VVITKGGERI SEVSARFTLD ALPGKQMAID ADLNAGLINQ EQAKTRRQET
GDEAEFYGSM DGASKFVRGD AIAGLLILFI NLIGGVLIGI FSHDMSAAES FQTFALLTIG
DGIVAQIPSL LLATSAAVIV TRVSNSDSDI SQTIKKQILS TPSVLYASAG VMTIIGLVPN
MPHLPFLIFA ALLGFVGWQQ SKIQEESQLE EVNQSVNPLQ SPSEEVLDWQ VVTDIEPITL
TLGFKLVSLL NIENGAPLLK SIKGTRKSLS EEVGFLIPEV TIRDNLSLKP DEYVIFIDGE
EMERGTVKTG YLMAVSSDDS FGSIDGIIGQ DPAYLMPALW ITPENKSLAI NYGYQVISLA
DVIATHINKV LSANLASIFN YDDIKAMNDK LGLIHPQLSE SLSAAVTPGL QLQIIKNLLI
DQVPVKNKKV IANTILDSIN KTKDPILISS DVRAALKRTI LSLISPDSKT LDLFVLSSEL
DNILRNAIAQ VQTQNPQTSL DEVPIDPNLL AQLQQNLPNI TQQMMQQGLV PILLVSPTVR
PMMSKFSRAF SRDLIVLSFN EIADDYQINA IGNLD
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