Gene Ping_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3412 
Symbol 
ID4625636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4215446 
End bp4216108 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content34% 
IMG OID639798526 
ProductOuter membrane protein and related peptidoglycan-associated (lipo)proteins-like protein 
Protein accessionYP_944695 
Protein GI119947015 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA AGCAACCATT TGTAATATAT AGGGAAAATG AAAATAATAC AGAAGGAACT 
GACTGGTTAT TGATAAGTGA CTTAATGTCG GGCTTATTAA TGATTTTTGC TTTATTAGTG
GTAGTAACTT TATTCCAATT AAAAATCACT CAGGAGCAGA TACAAAACAA AAGGGTGATT
GTTATTCAGG CATTACAGGA GCAATTTAAC GCAAATGGAA TCAGTGCTGA AATAAACCCT
GAAACTGGAG ATATAACACT CCTTGATTCC GTGCTATTTG ATTTTAATAA GAAACAATTA
AAGCAAGAAG GAAAAGATTT TTTAATAAAA TTTATTCCTG TTTATAGTGG TGTGATTTTT
TCTGAAGATG GCATCAGCGA TGAAATTAAC CGTGTCATTA TCGAAGGGCA TACAAGCTCA
GATGGTTCTC TAGGTTATAA CATGCAATTG AGTCTGGGGC GTGCTAACAG TGTTTTTCAG
TATATTCACT CTATGCCACA TGAAAGCAAC AAAGAGGCGT TTTTACAAAA AATCCAAGTT
GCAGGAAGGG GACCTATGGA TGCTAATTCA CACCACTCTG AGCTGGAAGA TAGAAAAGTG
ATATTTAGAA TGCAATTCAA ATCAGAAGAT GCTTTCAGTA AAGTATTAAA GTTGAAAAAG
TAA
 
Protein sequence
MNLKQPFVIY RENENNTEGT DWLLISDLMS GLLMIFALLV VVTLFQLKIT QEQIQNKRVI 
VIQALQEQFN ANGISAEINP ETGDITLLDS VLFDFNKKQL KQEGKDFLIK FIPVYSGVIF
SEDGISDEIN RVIIEGHTSS DGSLGYNMQL SLGRANSVFQ YIHSMPHESN KEAFLQKIQV
AGRGPMDANS HHSELEDRKV IFRMQFKSED AFSKVLKLKK