| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3340 |
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| Symbol | |
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| ID | 4625719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4128734 |
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| End bp | 4130575 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639798453 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_944626 |
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| Protein GI | 119946946 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCT TATATTACAC CCCGATTGCC TTTGCCTTAA CGACACTGTT CAGCGCAACA
AGTATTGCAG CAGCCCCCCC CATTTCAGAA CAAGATACAC GGGATGATAT TGTCATTTCT
GCCAGTCGCG TAGAAACTAA ACGTATTGAA AGCGGCAGCT CAGTAACAGT GCTTGATGAA
CAATATATAA AAGAAAATCA AGCGCGCACT GTGGCTGAAC TTTTACAGGA TGTGCCTGGC
GTGAGTGTTG CCAGTAACGG TGGTTTAGGG CAAGCGACCT CGGTATTTAT CCGCGGAGCT
AATTCCAATC AAACCTTAGT GATTATTGAC GGTATTGAAG TCAATAACTT AGGGAACTTT
GAAGGGGGTT ATGATTTTGC ATACCTGATG GCAGATAATA TTGAACGTAT AGAAGTCTTA
AAAGGCTCGC AAAGCGCACT TTGGGGCAGC GATGCTATGG GTGGCGTGAT TAATATCATC
ACTAAAAAAG GCAAAGCAGG ATTCCATCCA ACGGCTAGTA TCGAGGTTGG GGGAAATAAC
TATCATAAAG AAAATGTCAC TCTTAGCGCC GCACAGGGTA ACAGCCATTA TTCGCTATCA
GCCAGTAACA TGAAAACCGA CGGTATTAGT GCAACTGATA CCGATCCAGA TGACGATGGT
TACAAAAATC AGAGTGTCAG CCTAAAAGCC GGCCATCAAT TTACCGATAT TTTCTCAATG
GATACAGTGC TACGTTACAA CGATGCAGAA ACAGAATATG ATTCAGGCTA TACCACAAAT
AGTCAACGTC AGGCAAAATT AAGCAGCCAT CTTAACCTGT TAAATAATCA ATGGAAAAAT
CGTCTTTCAG TCGCTTTTTC TGATTCAAAC ACCGAAGATT TTTCCAGCTG GGGCGACAGT
AAATATGAAG GGAAAAAAAT AAAAACTGAT CTGCAGAGTG ATTATTATAT TAGTGCTATT
AATGGATACA CACAGCGCAT CTCATTCCTT GCCGAGCACG AAAGTGATAA ATATCAAAGT
TTGTCAATGA CTCAAGACGA GCGTATCGAA GCATCGGGAG TTGTTTTAGG CTATGGCGTT
GACTGGGCAA AAACAATTTT TGTTAACGTA GCTGTTCGTA GTGACTTTAA TAATAAATTT
GATGATACCA CCACCTACCA TATTGATACC TCAGTCTGGG TAAATGATGG TACACGTTTA
CATGCCAGCC ATGGTACCGG TCTCAAAAAC CCCAATTTAG GACAGTTATA TGGTGAGAAT
GCTAGCTGGG GTTATGTTGG AAATGCTGAT CTAAAACCAG AGAAAAGCCG CAGTTGGGAT
GCGGGTGTAG AGTATAACTT TGTGGGTACA GATGCTTATA TCGATCTTAC CTATTTTGAC
TCACTTTATA CCGATATGCA TACATGGTCT GGTAGTTTCC CTAATTCCAC GTATATCAAT
CTTAATAATA AAGCCACTGC ACGCGGTATT GAATTTACGG GTAAAGTAAA AGTGAGCAAT
AAATTACGTG TCAATACAGG ATATACCTAT ATGGAGACGA ATGACGGTAA CGGCAATGAA
CTGGCTCGTC GACCAAAACA TGCAGCCAGT ATCAATGCCA ATTACAAATA CACGCCTGAA
TTAAGTGCCA ATATTGGTGC TCGTTATGTT GGTAAACGCC TGGACAGTGA TGATTCAACA
CTCTCTAGCT ATACGGTTGT CAATATCAGC ACTGCATACC AGATTCAGGA ACATATCACC
CTTTCTGCCC GTATTGAAAA TGCGCTTGAT AAAGACTATC AAGAAGTTTC AGGTTTTAAC
ACTGATCCGC TTACAGCTTA TATCGGCTTT AGCTTTAAGT AA
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| Protein sequence | MPRLYYTPIA FALTTLFSAT SIAAAPPISE QDTRDDIVIS ASRVETKRIE SGSSVTVLDE
QYIKENQART VAELLQDVPG VSVASNGGLG QATSVFIRGA NSNQTLVIID GIEVNNLGNF
EGGYDFAYLM ADNIERIEVL KGSQSALWGS DAMGGVINII TKKGKAGFHP TASIEVGGNN
YHKENVTLSA AQGNSHYSLS ASNMKTDGIS ATDTDPDDDG YKNQSVSLKA GHQFTDIFSM
DTVLRYNDAE TEYDSGYTTN SQRQAKLSSH LNLLNNQWKN RLSVAFSDSN TEDFSSWGDS
KYEGKKIKTD LQSDYYISAI NGYTQRISFL AEHESDKYQS LSMTQDERIE ASGVVLGYGV
DWAKTIFVNV AVRSDFNNKF DDTTTYHIDT SVWVNDGTRL HASHGTGLKN PNLGQLYGEN
ASWGYVGNAD LKPEKSRSWD AGVEYNFVGT DAYIDLTYFD SLYTDMHTWS GSFPNSTYIN
LNNKATARGI EFTGKVKVSN KLRVNTGYTY METNDGNGNE LARRPKHAAS INANYKYTPE
LSANIGARYV GKRLDSDDST LSSYTVVNIS TAYQIQEHIT LSARIENALD KDYQEVSGFN
TDPLTAYIGF SFK
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