Gene Ping_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2446 
Symbol 
ID4627128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2993470 
End bp2994579 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content38% 
IMG OID639797581 
Productphosphoserine phosphatase SerB 
Protein accessionYP_943776 
Protein GI119946096 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.252251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.102746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATC GCAATAGTTA TGGTGTTAGC CATAATTTAA ACCCATTTAG GTGTAGGTAT 
TTTACAGTGA AAGTAATCAA AAATCTTTGT AACCCTTCAA ATTCTCAATC ACTGATTCAA
TGGCGAGATT GTTTAAAAGA AGATCTTAAT GAATTAGAAA ATCTCTTTTA CCATCAAGGA
AACTTAACGC AAGTATTACT TTCTGATTTT ACAGTGAAAG CAGAACTTAT TGTGATGGGC
AAACAATTTA CAACATTAGA TTTACATAAC CTACTCACCT TTTTAGAAAA TGAAAAAATC
GATACGATAC AATTATTTGC ACCTGAAATA ATAGAAAATA CAGTGGTTAT GTGTTTTTCT
TTAAATGCTT TCCCTTCCTC TTTAAAGGTT AAGTTAGATA ATTTTGCAGC AAGGTTTAAG
TTAGATTTTG CGTTGATGAA AAATTTCCCT GACTGGGGTA AACCAGGTTT AGTCTTGATG
GACATGGACT CTACCACTAT TCAAATAGAG TGTATCGATG AAATTGCACG ACTGTTTGGT
GTTGGCGAGC AGGTATCAGC AGTAACGGCT TTGGCGATGC AGGGAAAAAT AGATTTTAAT
GAAAGCTTAA GGACACGAGT TGGTAAATTA GCAGGGGCAC CTGTTTCAAT TTTAAAAGAG
GTTGCAGATA ATATGCCCTT GATGCCGGGC TTGCTTGAAC TCATCAAGGG CTTAAAGAAA
AGTGGTTGGA AAGTGGCTAT TGCTTCAGGT GGGTTTAACT ATTTTGCAGA TCGCTTAAAA
GACGACCACG GTTTTGATAT GGCTGTCGCA AACACCCTGG AAGTTGTCGA TCATCATTTA
ACTGGTCAAG TTGTTGGTGA AATAGTTAAC GCCAGCGTCA AGGCACGGAC ACTGTCTGAA
TTAATGGAGC GCTTTGATAT TCCAATATCA CAAACCGTTG CTATTGGTGA TGGGGCTAAT
GATTTAATGA TGCTGCAGGC GTCGGCGATG GGTATTGCCA TACATGCCAA ACCAATAGTA
CAAGAAAAAG CAGCAGTATC ACTGAACCAT TTGGATTTGT ATGGGGTATT GGGCATTTTA
AGTGCCAATA AGGGCACTCA TTGGCATTAA
 
Protein sequence
MINRNSYGVS HNLNPFRCRY FTVKVIKNLC NPSNSQSLIQ WRDCLKEDLN ELENLFYHQG 
NLTQVLLSDF TVKAELIVMG KQFTTLDLHN LLTFLENEKI DTIQLFAPEI IENTVVMCFS
LNAFPSSLKV KLDNFAARFK LDFALMKNFP DWGKPGLVLM DMDSTTIQIE CIDEIARLFG
VGEQVSAVTA LAMQGKIDFN ESLRTRVGKL AGAPVSILKE VADNMPLMPG LLELIKGLKK
SGWKVAIASG GFNYFADRLK DDHGFDMAVA NTLEVVDHHL TGQVVGEIVN ASVKARTLSE
LMERFDIPIS QTVAIGDGAN DLMMLQASAM GIAIHAKPIV QEKAAVSLNH LDLYGVLGIL
SANKGTHWH