Gene Ping_1591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1591 
Symbol 
ID4625388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1945662 
End bp1947128 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content40% 
IMG OID639796778 
Producthypothetical protein 
Protein accessionYP_942988 
Protein GI119945308 
COG category 
COG ID 
TIGRFAM ID[TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.359365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TTAAAGACGA TTTTATTTCA ACCTCACAAG GCAAAATCTC CTTAAAAACA 
ATTTTAACCG GTGAGCAGAA CTATCAACTG CAATACTATT TTGATGAAAT TCAGCTGGCA
ATGTTACAAC TGTTAAGTTC GCTAAGCACT GTTGTATTAC AACCAACGGT TCAAGAGCTT
AAAGATTATT TAAAAAATGG ATTAACACCT GAACAATATG AAGCTGCTTT GGACAAAGTA
GAAAGCCAAT GGTTTGAAAG CGATTGTTTT ATGCAATCTA AACCGCCAAC TAATGCTAAA
TGGCCTGATG CCCCAATTAC CAAGTTACTA TCTGGCATTG AATGTGGAAC ATCTGCTAAT
GCGATGGGGC TTTTCTCGGA AATTGAACAA GCAGAAATAA GCTGTACCGA CTGCATGCAT
GCATTGAATT ATAACTTGCA CATGAATATC AAGGGTGAAT GCTTTGGTCC TACAGGTGCC
ACCGGTATTC GAGGTGGAGG GGCAATTAGT ACCTTAATCG CAGGTGAAAA TTTAAAACAA
ACACTTTTGA ATAATACCAT TGCCAAAGAT TATTTTAATG ATTATGCACA ACTTGACAGC
GATGCCGAGC AGAGACCGAT GTGGGTAGCC CCCTTATCAG GGAGCGTTTA TCAGGCATCA
AAAATCGGTA TTAATCGTGG TTTATTTGCT TTGGCGTATC ACATCGGTTT TAACATTGAA
GATAAACCTT GTCTTTGTGA TGTTTGCGGT AGTGAGTCGG AACAATCAGT AAAAACATTT
AATCGTGAAA AATATAAAGG TAATTATGGT TCAACTAAAA ATGGACGAGA AGCTGGGGCT
GGCTGGTGGC CACATCCTTA TACACCGCGA ACCATAAAAG AAGAAGGGGC TTTTGCGGTG
TGTGCGCGTG ATCAAAACTG GCAAAGTTGG CAAGAACTTG GAAGTTATAT CGTGGGCAAA
GAAACGGATA AAGCGACGCT AGAGCCTGCT TATATTATTA AGCAATTTCA ATATATGAAA
ACCCCGCGTC AAACCAATTT ATTAGTCGGT GGCAATATTG CGGATCAAGG AGGGATTACG
GGTCGGGTAT ATGATTTGTA TTCCATGCCC TCATCGTTGA ATAAACACTT GAGCAAAGTG
ACTCAGGTAC TTGATTCAGG GCTTGATCAA AAAAACCGCT TATCGCAGGC ATTTAACAAA
ATGTTTGGCG CAGGCTATGA CAAAAATTTT GTTGGGGGAA TTAAAGAAAA TGCGATGTAC
CGCTTTACGG CAAATGCTCA GCAAATTATC CAACGAACCC TGCTTGATGT TGAACGCAAA
GAAGCCACTG AATTAAGAAA AACAGCCGTC ATTGAACTTA AGCAAGAAGC ACAACGGATC
TTTATGGGAG TTCAACGAAA ATATCAGCAT GATCTTCCTC TTTTTAAAGC ATTAGTAAAA
GGAGAGAGCG CACTCTATCG AAAATAA
 
Protein sequence
MNLLKDDFIS TSQGKISLKT ILTGEQNYQL QYYFDEIQLA MLQLLSSLST VVLQPTVQEL 
KDYLKNGLTP EQYEAALDKV ESQWFESDCF MQSKPPTNAK WPDAPITKLL SGIECGTSAN
AMGLFSEIEQ AEISCTDCMH ALNYNLHMNI KGECFGPTGA TGIRGGGAIS TLIAGENLKQ
TLLNNTIAKD YFNDYAQLDS DAEQRPMWVA PLSGSVYQAS KIGINRGLFA LAYHIGFNIE
DKPCLCDVCG SESEQSVKTF NREKYKGNYG STKNGREAGA GWWPHPYTPR TIKEEGAFAV
CARDQNWQSW QELGSYIVGK ETDKATLEPA YIIKQFQYMK TPRQTNLLVG GNIADQGGIT
GRVYDLYSMP SSLNKHLSKV TQVLDSGLDQ KNRLSQAFNK MFGAGYDKNF VGGIKENAMY
RFTANAQQII QRTLLDVERK EATELRKTAV IELKQEAQRI FMGVQRKYQH DLPLFKALVK
GESALYRK