Gene Ping_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1116 
Symbol 
ID4626246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1399716 
End bp1400828 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content44% 
IMG OID639796332 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_942553 
Protein GI119944873 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.177687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGTG ATTTTTTAAC GCTTGCTAAT GCGGGGGTGC AAAAACTGCA TCCCTACCAA 
GCCGGTAAAC CAACGTCTGA ATTAGAACGA GAACTTGGCA TCAGTGATAT TGTCAAACTT
GCTTCCAATG AAAATCCGTT AGGTCTGAGT GAGAAAGTGA AATCTGCACT GCAAAGTGAA
TTTTCTGAAT TAGCCCGTTA TCCAGATGCC AACGGTTTTT ACCTTAAGCA GGCACTTGCC
GATAAATATA ACGTCGGGTT AAATCAGGTG ACCCTAGGAA ACGGCTCAAA TGATTTGCTT
GAACTGGTTG CGCGGGCATT TGTAAGCGCT GAAAATGAAG TGATATTTGC GCAGTTTGCT
TTTGTTGTTT ATCCAATAGT GACACAAGCG ATTGGCGCAA AAGCAGTGGT TGTTCCGGCA
AAGCATTACG GTCATGATTT AGCGGCAATG GCCGCTGCCG TGACGGATAA AACAAAACTT
ATCTTTATTG CCAATCCGAA TAACCCAACG GGCACTTTTC TAGAAGCGGC TGACATTCTA
GCCTTTCTGA GTAAGGTGCC GGCGCATGTC TTAGTCGTAT TGGATGAGGC CTATTTTGAA
TATGCAGCGC CCGAACGACG TGGTAATGCT ATCGCATGGA TTAAAGATTT TCCCAATTTA
ATTGTTTCCC GAACCTTCTC AAAAGCCTAT GGTCTTGCGG GCTTGCGTGT CGGTTACAGC
GTTTCAAATC CGCAAATTGC AGATATCCTT AATCGCGTAC GCCAACCCTT TAACTGTAAT
GCTCTAGCGC TTAAAGCGGC AGAGACCGTT TTACAAGATG ATGAGTATTT ACAGGCGGGG
ATTAAGTTAA ATAATGCGGG CATGGCAGAC TTAAGTGCTT TTTTCAGTCA ACATAACCTT
GAATATATTC CTTCAATGGG AAACTTTATT ACGGTCAATG TTGGCCAATC TGGGGACGTT
GTCTATCAGG CGTTATTACA TGAAGGTGTG ATTGTACGCC CGATAACGGG CTACGGCTTA
AGCGACCATC TGCGTATTAG CATCGGCCTG TTCGATGAAA ACCAGCGTTT TAAACAAGCC
TTAGTTAAAG TGCTTAAGTT AGATCAAAAA TAG
 
Protein sequence
MSCDFLTLAN AGVQKLHPYQ AGKPTSELER ELGISDIVKL ASNENPLGLS EKVKSALQSE 
FSELARYPDA NGFYLKQALA DKYNVGLNQV TLGNGSNDLL ELVARAFVSA ENEVIFAQFA
FVVYPIVTQA IGAKAVVVPA KHYGHDLAAM AAAVTDKTKL IFIANPNNPT GTFLEAADIL
AFLSKVPAHV LVVLDEAYFE YAAPERRGNA IAWIKDFPNL IVSRTFSKAY GLAGLRVGYS
VSNPQIADIL NRVRQPFNCN ALALKAAETV LQDDEYLQAG IKLNNAGMAD LSAFFSQHNL
EYIPSMGNFI TVNVGQSGDV VYQALLHEGV IVRPITGYGL SDHLRISIGL FDENQRFKQA
LVKVLKLDQK