| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0036 |
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| Symbol | |
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| ID | 4624966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 53800 |
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| End bp | 54942 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639795229 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_941510 |
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| Protein GI | 119943830 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.069564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00131086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCAGATA GCAGAATGAA AGTAGCAGTT GTTTTTGGTG GTAAATCTAC AGAGCATGAT
GTGTCAATTA TTTCTGCAGG ACATATACTT GCAAATATTG ATATGGAAAA ATATTTTGTT
GAACCATTTT ATGTTAAGAA AGATGGGACA TTTGCAGATC ACCAAGAATT AACACTTTGC
CTAGAAAATC TATTAAATGA GCATAGAGAT AAAATCTTTC CAGCAATGAA AGAAGGTGAA
ATTGAGCTGA AAAAGTGGAT AGCCAAAGGT ACTTCTTCAG ATTTTTTAGG CGGAATTGCT
GGGAAAAAAT TTGATATTGT GTTTCCTGTG CTTCACGGAC TAAACGGAGA AGATGGAACC
ATTCAAGGAA TGCTTGAATT CATGGGAGTA CCTTATGTTG GCTGTGGTGT AAGTGCATCT
GCTTTTTGTA TAGATAAAGA AGCCACAAAG GTAATATGCC AGGTAAATGA TATACCTGTG
ATGGATTATA CTGCAGTAAA AAAATATGAG TGGGAAAATT CAACAGAAAA TATAATCAAT
GATATTCAGA AAAAAATGAA TTACCCGTTT TATGTAAAGC CTGCGAGACT CGGTTCTTCA
ATTGGTATTT CAAGAGCGGA AAATACTGTT GAACTTAAAA CTTCACTTAA AGACGCATTT
AAATATGACT GCAAAGTGGT AGTCGAGCAA GGAGTTGAGT CCCCTAGGGA GCTTACTGTT
GGTGTGATGG GGATTGATGA CCAAGTATCA TTAAGTGCAA TAGGTGAATT TAGCCGTGGG
AGTAATTTGT ATTTTAATTT TGATTCAAAA TATGGCAAGA CCGGCCATAA AGGGCTTGTG
CCTGCTCCGC TGGAAGAAAA TATACAAGAA ATTATAGAAA AATATTCTCA TCTGATTTTT
AAAAAATTTG AGTTATCAGG TTTTGCAAGA ATAGATTATT TTTTATGTGG TGACAAAGTG
TACCTGAATG AGATCAATAC GATGCCAGGA TTTGAAACGG GTGATACTTT TATGCGAATA
TGGCAAAATA AAGGCGTGGA TATGCAAAAA TTTATTGATA AGGCAATAGA GTACGGGGTT
TTAAGCTTTC ATAGCAAATC AACAAGGTTA TATGAAATAG AGATTAAGAG CTTAATAGAA
TAA
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| Protein sequence | MSDSRMKVAV VFGGKSTEHD VSIISAGHIL ANIDMEKYFV EPFYVKKDGT FADHQELTLC
LENLLNEHRD KIFPAMKEGE IELKKWIAKG TSSDFLGGIA GKKFDIVFPV LHGLNGEDGT
IQGMLEFMGV PYVGCGVSAS AFCIDKEATK VICQVNDIPV MDYTAVKKYE WENSTENIIN
DIQKKMNYPF YVKPARLGSS IGISRAENTV ELKTSLKDAF KYDCKVVVEQ GVESPRELTV
GVMGIDDQVS LSAIGEFSRG SNLYFNFDSK YGKTGHKGLV PAPLEENIQE IIEKYSHLIF
KKFELSGFAR IDYFLCGDKV YLNEINTMPG FETGDTFMRI WQNKGVDMQK FIDKAIEYGV
LSFHSKSTRL YEIEIKSLIE
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