| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0011 |
|---|
| Symbol | |
|---|
| ID | 4625100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 17602 |
|---|
| End bp | 18108 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639795204 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_941485 |
|---|
| Protein GI | 119943805 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATGA AAGACAAGCG CTCAGGTTCA GTTGCACCTA AAGAGCGTAT TAATATATCT
TATAAACCAG CGGTAGGTAA CGCTAAAGAA GCCGTTGAAC TCCCTTTTAA ACTGCTAGTC
TTAGGAGATT TCACCCAAAG TCAAATAGTT ACTTCTCTGG AAGATAGAAA GTTAATTAAT
ATAAATAAAT ATAATTTCTC CGATGTAATG GATAGCTTTG ACCTTAAAGT TCAATTTAGT
GTAGAAAATA AAATCAATAA AGGAAGTGAT GAGCCAATTG ATATATCTCT AAGTATAAAA
CAGTTAAGTG ACTTTGAACC AGATAGTATT ATCCAACAAG TTGATGAATT GAAAAAAGTT
CTTGAGCTTC GAGAGGCATT AAAAGCACTG AAAGGCCCAA TCGGTAATTC CCCTCAAATG
CGTAAACAAA TACGCAACCT TTTAATTGAT GAAAAATCAC GAAATGAATT AAAACTTGAG
CTGGGTTTAT CTGCTAATAA ACAATAA
|
|---|
| Protein sequence | MSMKDKRSGS VAPKERINIS YKPAVGNAKE AVELPFKLLV LGDFTQSQIV TSLEDRKLIN
INKYNFSDVM DSFDLKVQFS VENKINKGSD EPIDISLSIK QLSDFEPDSI IQQVDELKKV
LELREALKAL KGPIGNSPQM RKQIRNLLID EKSRNELKLE LGLSANKQ
|
|---|
| |