| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0884 |
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| Symbol | |
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| ID | 4617522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 790306 |
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| End bp | 792678 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639783980 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_930403 |
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| Protein GI | 119872396 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.922995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.368139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAGGA TAGAAAAGAT TGAACTAGAA AATTTCAGGT CATACAAGGG GAGACATGAG
GTAAGCCTAG GGGATGTTAC AATTTTATTG GGAAGAATCG GGGCTGGGAA GACCTCTCTC
CTATATGCCA TAGAATATGC CCTCTTTGGA AAACAGCTTG AGGTAAGAGA GAGAGTAGCA
AAACTTGTAG ATCTGATTAA TGTAGACGCT CAGGAAGCCA ATGTAGCGCT AGAATTACGC
AGAGGCAACG ACAAACTTCG TATAGAAAGA AGACTAGGGC GGCGGGGATC TGAGAAGCTT
GTTGTACTTT ATAACGGCAT TAAACTAAGA GATAGAGATG CTGAAGAAAG ACTAGTTGAA
CTCATAGGAG CCGACGAAGA CATATATGAA CGACTTGTAT ATATTTCGCA TAGGACTCTA
GAGGGTTTTA TATACGGCAC AGCACAAAAG AGAACGCTTT CAGTAGACCG TCTATTTGGT
ATTGACATAA TTGACAACAT TTTAAGAGTT GTGTCATCTA TAGAGAAATA TCTGTTGGAG
AAAGCCGAAA ATTTGAGAAA AAGACTTTCT ACATATGAAA AATATAGAGA TATAATTAAG
AAATATGGTG GCTATAAAGG CGTTGTAACT AGGTTAGAGA CTATAGAAGG TGAGCTGGCG
GCGTTAAAAG AGCGCGAGGT AAATCTTACT AAAACAGTAG AAGAGTTAGC CAAGAGAAGA
GCCGGCTATT TGGAGAAAAT CAGAGAGAAC GAGAACATTT TATTGGAGTA TTACAAAACG
AGATCTGAAT TAGAGATCTT GGAATCAACT ACAGGCGAAG ATGTTGGTTT AGACGCCGTT
GAGAAAATTA GAGACGCTCT GCAAGAGGCC TTAGAGGAGT ATGAACATAT ACTGGGGCAT
GAGCTTCTTG AAAAACTCAC AACTAGAGAC CTAGAATCTT TATCGGCTGC CATGGTTGAA
GCTTATGAGG CCCTTGTTAG ATTATCAAAA GATTTAGAGA GTCAGATTTC TGAAGTACGA
AAGACATACG AACAGTATCT AGCTAGGGTG AAGAAGCTTG AAGACGAAAT TAAAGAAGTT
GAGACTAAAC TGAGGAGACT TGAAAGGTCA TATATACGGT TTAAAGAGCT TCAGAAGTCG
TTTCAATCTC TAGAAACGGC TAAAGCTGCC CTCAACGAGT TGAAGAGGAG GCTCGAAGAA
ACTGAGAAAT CTATGGCATA TATTTCGGCT CTTAAGACGG TATCTCTCTA TATTGCGGAA
ATAGGCGTCA ATAGATGTCC TATATGCGGC TCTCCCATAA GTCGGGAGGT TGCGTTAAAC
ATAGCTAGAG AGGTAGAGAG CAAATTTGGC GAGTTAATAC ACGAAGTAGA AAATCTAAAG
GAGAGGATTA GAGAGTATGA AAAAGCTGTA GACGAAATGG AAATATTAAG CGGCGAGGTT
GCAGAGTATT TATCCACAAA GAATAGACTA GAGGAGTTAA AACTTGAGAG AGAAGAAATC
ATTAAGAAAA TGATACAGGC TGAAAAAGCA CTTAAACAAC TAGAGAGACG TGTTGAAAAA
TTACACTCTT TGATAACTAG GGTTGACAAA CGCACGATTT TAGATGCGCT TTCTAAATAT
GGAAAGATGC TTAGAGTTCG AGAGCTAAAA CGCCGCCTTA AAGAGCTTGA GGAAATGTTA
AACAAAGCCG GCGTCGTTAG AGAAATCTTA GATGTGGAAA TGCGCTGGAG GGAGATTACC
GAAGAGCTAG AGAGAACTTC TAGCCGTTTA GCAGAATTAT ACAGAGAGAA GGCTGTATTA
GAAGAGATTG TAAGAGAAGT GGGGGGAGAT GCGGAAAATT TGAAAAAGGC ACTAGATAAC
ACGCTTTATG CCTATAGCAA GCTACAAGAA GTTAAGGCAA AGTTTGAACT TGTCAAAGTC
AACGCGAGAG CTCGGTTAGT GGAGATTGCA AAATCTCGCT TTAACGAAGT ATTTCTAACG
CTCTATAGAT ATGGCGATAT TTCAAAAGTA AATGTAGATC TAGAACAACG TAAGGGCTAC
TACGACTTCT ATGCGATATC TCCCACTGGC GAGAGATACG GTATTTCAAA GCTAAGCGAT
GGACAAAGAC TTTCGATAGC TCTAGCCCTA GCTCTCGCGC TTAGGGAAAT ATCCAATATA
CAAATTGGCT TTATAATATT TGACGAACCT ATTCCATATG TTGATGTAAA TATCAGGAGA
GCTTTCGCAG AATTAGTTAG ATCTCTTTCT TCACGTTATC AGATCGTAGT AGCTACACAG
TCTGGCGATT TTGCAGATGT GATAAAAGAC GCGGTTCCAA ACGCAAGACT ATATATGGTG
ACTAAGGAGG AAAGTTCTAG AGTTGCAGAG TAA
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| Protein sequence | MWRIEKIELE NFRSYKGRHE VSLGDVTILL GRIGAGKTSL LYAIEYALFG KQLEVRERVA
KLVDLINVDA QEANVALELR RGNDKLRIER RLGRRGSEKL VVLYNGIKLR DRDAEERLVE
LIGADEDIYE RLVYISHRTL EGFIYGTAQK RTLSVDRLFG IDIIDNILRV VSSIEKYLLE
KAENLRKRLS TYEKYRDIIK KYGGYKGVVT RLETIEGELA ALKEREVNLT KTVEELAKRR
AGYLEKIREN ENILLEYYKT RSELEILEST TGEDVGLDAV EKIRDALQEA LEEYEHILGH
ELLEKLTTRD LESLSAAMVE AYEALVRLSK DLESQISEVR KTYEQYLARV KKLEDEIKEV
ETKLRRLERS YIRFKELQKS FQSLETAKAA LNELKRRLEE TEKSMAYISA LKTVSLYIAE
IGVNRCPICG SPISREVALN IAREVESKFG ELIHEVENLK ERIREYEKAV DEMEILSGEV
AEYLSTKNRL EELKLEREEI IKKMIQAEKA LKQLERRVEK LHSLITRVDK RTILDALSKY
GKMLRVRELK RRLKELEEML NKAGVVREIL DVEMRWREIT EELERTSSRL AELYREKAVL
EEIVREVGGD AENLKKALDN TLYAYSKLQE VKAKFELVKV NARARLVEIA KSRFNEVFLT
LYRYGDISKV NVDLEQRKGY YDFYAISPTG ERYGISKLSD GQRLSIALAL ALALREISNI
QIGFIIFDEP IPYVDVNIRR AFAELVRSLS SRYQIVVATQ SGDFADVIKD AVPNARLYMV
TKEESSRVAE
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