Gene Pisl_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0576 
Symbol 
ID4616302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp529749 
End bp530036 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content45% 
IMG OID639783666 
Productribonucleoprotein complex SRP, Srp19 component 
Protein accessionYP_930097 
Protein GI119872090 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1400] Signal recognition particle 19 kDa protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00280682 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAAC GAGGCGGGAG AATACTCTGG CTTGTTTACC TAGACTCGTC GGTCCCTCGT 
TCTCGGGGTA GAATTTTGCC GCGAAGTAAA GCTGTGAGTA AGCCGACTTT ACAAGAAGTT
ATACAGGCTT TAGAGAGACT GGGGTATAGA TATCAAGTGT ACCAAGATAA AAAGTATCCG
GCGCTTTGGT TTGAAGAGCG GCAGGGCTAC ATCGTGGTAG AAACTAGTGA AAAATTACGT
ATACTTGCGC TTAAAGTTGC GGAAGAGGTA AGAAAACTCA GGCGTTAA
 
Protein sequence
MKKRGGRILW LVYLDSSVPR SRGRILPRSK AVSKPTLQEV IQALERLGYR YQVYQDKKYP 
ALWFEERQGY IVVETSEKLR ILALKVAEEV RKLRR