Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0076 |
Symbol | |
ID | 4617274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 72004 |
End bp | 73806 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639783158 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_929603 |
Protein GI | 119871596 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.147749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTTA TCAAACTCTC GACGACATTG GGGTATACAT ACCTAGGGCT CTTCTTAGTG GCGCCGATAG TCTTTATCTT TTGGCAAGTC CTCGCAGGGA TAGGCGAGAT ATACACATCG ATAACAGACC CCTTTTACAT AAACCTCTCT CCCGACGCCT TCTCTAACGC AATATATATC AGGCCGACAG ACCCGCCTAC TCTTGTAATA CGGGGGCCAG ACCTCGGCGT GATTATAAAC AGCCTCTGGG TCGCCCTCCT CGTCGCAGCC GTCGACACAA CGCTGGGTTT CGCCCTCGCC TACGTCCTCG CCAAATACGT ATTCCCCGGC AGAACAGCCC TAGGCCTCCT AGCCACCCTC CCCCTAATCG TTATGCCCTT TGCCACAGCC TACGTCGTGA GGAAGTTTTT AGACCCACGC TGGGGCACTC TAAACTGGAT ACTAAGCGCC TTCCTCCCCC TCCGGATAGA GATCTCCGGC TTAGCCGCCG TAGCTATCGT ACAGATCTTA ATGTTCCTTC CCATAGCGTA TTTAAATATC TACGCCGCAC TCACTCGAGT CGACCCAACG CTAGAGGAAG TGGCTGCGAA TCTAGGCGCA GACGAACGGC GGACAATCCG CGACGTAGTG CTCCCCCTCT CCACGCCGGG CCTCGCCGCC GCCTTCGTCC TCGTCTTCAT CTTCGCCATA GACGACGTGG CAGCCCCCAT AATATTCCAA GACGACCCAG CCGCTCGGAA GCTCCTCTCA TACCAAGTCT ACTCTAAGTT TCTAGACCAA CTACGTGGGC AGATAAGCCC AACTGCGGCC TTCCTCGCCC TAATCCTCCT CACAATCTCA ATAACAGCCT TCCTCGCCGT GAGGAAATAC GTCGGACTGA GACAATACGC CATGTTGATT AGACAGCTCA GGCCGAGGGT CTACAGGCCA GGCCCCCTGG GCAAGGCCGC GATATATCTA ATCGCCTTTC CCCTAGTCCT CACAGCGGCG GCCCCCCTCA TAGGCGCAAT AGCGCTAGTC TTCGCAGAGA GGTGGACTAC TACTCCACTC CCAGAGGCGC CTTCGTTACA AAACGCCGCG GATCGCATAG CCGAGGTTTT CCAAAACTCA CTATTCCTCC GAGGCGTGAT AAACACAGTC TACTACGGAG TTACGGCCAC CCTCATAATG GTGGGTATAG GGCTGTTAAT CGCTCTGGCC GCGGCTAGAT CTAGAGGACC CGCCGCAGAC GCCCTAGACG CCTTGGCCAC GATGCCCATA GCCATACCTG GCCTCGTCGT GGCCTACGCC TACTTCCTCA CCTCACTCCA ACTGTCGACA TTTCTCAAGC CTACGGCCCC CGCCCTCGCC CAAGCCCTCG ACCCCCTCCG CCACCCCGAG CTCTACCTAA TCGTGGGCTA CTCCGTCAGG AAGCTCCCCT TCGTAGTCCG TAGCATATAC GCCGGGCTAC AGCAGATCCA CCCCTCTATG GAGGAGGTAG CTATGAACCT CGGCGATGGA TACTTCGGCG TCTTGAGGAA GATACTAGTG CCCCTCCTCA AGACCAACAT ACTCAGCGGG GCGTTGATAG GCTTTGTCTA CGTCACCAGC GAAGTCTCCC TCAGTATTAC CCTCGGCGTC CTCAAGGGCG TTGGCCAAGA CACAGCCATG CCAATAACCG CCTTTATGCG GGAGAGGTTC GAAAGCGGTC TCTACGGAGT GCAAGAAGCC GCAACTCTAG GCCTAATTCT GGTATTAATA CAGGTGGCGG CTATAACACT AACTACAAGA GTGTTGAAAA CTAGGTACGG GTTTATACTC TGA
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Protein sequence | MRFIKLSTTL GYTYLGLFLV APIVFIFWQV LAGIGEIYTS ITDPFYINLS PDAFSNAIYI RPTDPPTLVI RGPDLGVIIN SLWVALLVAA VDTTLGFALA YVLAKYVFPG RTALGLLATL PLIVMPFATA YVVRKFLDPR WGTLNWILSA FLPLRIEISG LAAVAIVQIL MFLPIAYLNI YAALTRVDPT LEEVAANLGA DERRTIRDVV LPLSTPGLAA AFVLVFIFAI DDVAAPIIFQ DDPAARKLLS YQVYSKFLDQ LRGQISPTAA FLALILLTIS ITAFLAVRKY VGLRQYAMLI RQLRPRVYRP GPLGKAAIYL IAFPLVLTAA APLIGAIALV FAERWTTTPL PEAPSLQNAA DRIAEVFQNS LFLRGVINTV YYGVTATLIM VGIGLLIALA AARSRGPAAD ALDALATMPI AIPGLVVAYA YFLTSLQLST FLKPTAPALA QALDPLRHPE LYLIVGYSVR KLPFVVRSIY AGLQQIHPSM EEVAMNLGDG YFGVLRKILV PLLKTNILSG ALIGFVYVTS EVSLSITLGV LKGVGQDTAM PITAFMRERF ESGLYGVQEA ATLGLILVLI QVAAITLTTR VLKTRYGFIL
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