Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2012 |
Symbol | |
ID | 4604262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2445564 |
End bp | 2447072 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781389 |
Product | guanosine-5'-triphosphate,3'-diphosphate diphosphatase |
Protein accession | YP_927887 |
Protein GI | 119775147 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00809551 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCATCAT CAAACCAGCG ACACTTCGTT GCTATCGATA TGGGTTCGAA CAGCTTCCAT TTGATGATTG CCCGTGAGCA AGACGGCAGT TTGCAAATTC TGCATAAAGA AAAAGCACAG GTACAGTTGG CTCAGGGCCT GAGTCCGGAA GGCTATTTAT CCGATGAAGC CATCGGTCGG GGCCTCGAGT GTCTGCGCAA TTTCAGTCAA CGGTTTTCAG GCTTGTGCGA AACCCAGGTG AGACTGGTAG CAACCCACAC CCTGAGGGTC GCCCGCAATC GAGACAAATT TTTAAAAGCG GCACTGACGG TGATCCCCTA TCCCATCGAG GTGATTTCCG GCCACGAAGA AGCGCGACTT ATCTATTCGG GCATCGCCCA AAGCCAAGTG CTCGCCAAAC ATAACCTGAT TATCGATATC GGCGGTGGCT CCACCGAGGT GGTGATTGGT GAAAAGAATC AGCCTGTAAT GCTCTCAAGC CTTCGTTGTG GTTGCGTGAG CTATAACGAG CGCTTCTTTT CCGATGGTCA GCTCACCCTA AGTGCCTTTC GCGCTGCGCA AACTGCCGCC GATAAGCAGT TTTCATCACT CTCAAAAGAC TATTTCGATG GTCGTTGGGA CTTGGTGCTG GGCAGCTCGG GGTCAGTCAA AGCCATCTGT GAAGCATTGC TTGAAAGTTT TGGCGATGAA ACTGTCACCC TGCCAAGGCT AAAAGAGCTG AAACTCAAGT TGGTCCAGGC AGGTCATGTG GATGCGTTGC AATTTACCAA TATTGATAAA AAGCGCATCA CTCTGGTGCC TGCCGGACTT GCGATTCTTA TCAGTTTTTT CCGGCGACTT GCCATAGAAC AGCTGGAGCC CACCCCTGCG GCGCTGCGGG AAGGCGTGCT GTACGAGCTT GCCCAAATCG ACCAGTCACA GGATATTCGT CACCGCACGG TAGAGAGCAT CGCCAACCTC TATCATGTGG ATACCAAGCA CGGTGCCAGG GTGCGTAACA CCGCCATGGC ACTTTTTGAC AGCGTGGCCG ACAGCTGGCA AATCCGTCCC TTTGCCCGGC TCCTGTCTTA CGCCGCTTCA TTGCATGAAA TCGGCATTCA CATCAATTCC CGTGCTTACC ACAAGCACGG GGCCTACATC ATCGCCAACA GTGACCTTCC CGGTTTCAGT CAGGACTTGC AGCAGGACTT GGCGATGTTA ATCGGCAACC AGTGTAAAAA GCCGCAGTTT GATACCATCA ATGCCCTGCC CGATGGTCGC CGTGAAGTAC TGGTAAAACT CTTGTGTTTG TTGCGTCTTG CAATCCTGGT AAATCTCGGC CGGGTCGCCC GTTCATTGCG CCTGAGCTGC GCTGTATTGG ATACCAATGA GTTGGCGGTT ATCCCCGAGC AAAGCGCACG GGTTGATCTG CTGCTTAAAG ATTTGAAACG AGAGAAGAAA CATTTGGGCC AGCTTGGCCT TATTCTAAGA CTGGACAGCG AGCTTCCCTC TCCCGCTGAC GAAGACTGA
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Protein sequence | MSSSNQRHFV AIDMGSNSFH LMIAREQDGS LQILHKEKAQ VQLAQGLSPE GYLSDEAIGR GLECLRNFSQ RFSGLCETQV RLVATHTLRV ARNRDKFLKA ALTVIPYPIE VISGHEEARL IYSGIAQSQV LAKHNLIIDI GGGSTEVVIG EKNQPVMLSS LRCGCVSYNE RFFSDGQLTL SAFRAAQTAA DKQFSSLSKD YFDGRWDLVL GSSGSVKAIC EALLESFGDE TVTLPRLKEL KLKLVQAGHV DALQFTNIDK KRITLVPAGL AILISFFRRL AIEQLEPTPA ALREGVLYEL AQIDQSQDIR HRTVESIANL YHVDTKHGAR VRNTAMALFD SVADSWQIRP FARLLSYAAS LHEIGIHINS RAYHKHGAYI IANSDLPGFS QDLQQDLAML IGNQCKKPQF DTINALPDGR REVLVKLLCL LRLAILVNLG RVARSLRLSC AVLDTNELAV IPEQSARVDL LLKDLKREKK HLGQLGLILR LDSELPSPAD ED
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