| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0635 |
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| Symbol | |
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| ID | 4602888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 787020 |
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| End bp | 792071 |
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| Gene Length | 5052 bp |
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| Protein Length | 1683 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779970 |
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| Product | serine protease |
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| Protein accession | YP_926513 |
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| Protein GI | 119773773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGCGG CGGCCAGCTT GAACGTCAAC GAGCAGCATA AACTCGAACC CCTGAAGCTG
ACTACTGAAC AAATCGCTCA ATTGCAGAGC GGCTCACCCG TTACCGAGGA TAGCCTTGGT
CACGGTGAAG GTCTGAATAT CCAGATCACC CCGCAGTCCC GCCGCTTCGA GTACGAAGAA
GGCCTCAGCG GTGAACATGT TTACATCGTT ACCTTGCGCG ACAAGCCGCT GGCCAACTCC
GGTGTGGGTA TCCAGGCTCG CAGTGCCAAG GGTGGCAAAG GCAAACTTTT TGTTGCCGGT
AAGCCAGTGT CCAACGAAGT GGCTGCTTAC CGTTCAAAAC TGCTCAGCAA ACAAAACGAT
GTATTGGCTG CGGCGTCCGC CGTTGTGGGA CATCGCGAAG TGCGTGCCCA ATTCACCAAT
GCCGTAAACG GTTTCTCCAT GGCCATGACC CGGGACGAAG CCAAGCGTAT GTCAGAGGTA
GCCGGTGTTG CCACAGTGCG CCGCGCCAAG ACTTACGAGC TGCTGTCCGA TGCAGGTCCG
GAGCTTATCC AGGCCAATAA GATTTGGGAT GGCAGTGTTA CCCAATCCGT ACCTTACAAG
GGTGAAAATG TGATTGTCGG TATCGTGGAT ACCGGTGTGA ACACTGACCA TGCCTCTTTT
GCCGATATCG GTGGTGACGG TTACGATCAC ACCAACCCAT GGGGCGCGGG CAACTACGTT
GGTGACTGTG CCAAAGAAGG CTTCGAAACC CTCTGTAACG ACAAGCTGAT TGGTGTACGT
TCTTACCCTG TTATTACCGA CAACTTCACC AGTGGTGTGT TTGGTGATAC CCGTCCAGCC
GTGGGTGAAG ATTACCAGGG CCACGGTTCA CACGTGGCAT CGACTGCGGC CGGTAACGTG
CTCTTTGATG TGCCATTCTC ATCGCCAACG CCTGATGCTG TCTCTGATGG TGCCATCATC
AAGGAAGGCC TGTTCCCCCG TATCAGCGGT GTAGCACCGC ACGCAAACAT AGTGTCATAC
CAGGTATGTC ACCCTTCCAA CGACGTGGGT GAGTTCCGCG GTTGTCCGGG AGAGGCGCTG
ATCGCCGGTA TCGAAGATGC CATCAGCGAT GGTGTGGATG TGATTAACTT CTCCATTGGT
GGTCAGGATT CTCACCCATG GAGCGACGAT GTGGAGCTGG CCTTCCTGGC CGCCCGTGAG
GCAGGCATTT CTGTGGCTGC TGCTGCTGGC AACTCAGGTC AGCCCGTTGG CTACAAAGAG
TATTTTGGCG CCATCGACCA TGCATCTCCC TGGCTGATGA ACGTGGCTGC CACCACCCAC
GACCGTGAAG TGGTTATTGA GACCAAATTG ACTGACCCCA TGGGTGGCAA CGAAACTCCC
CGTTGGAGCG AAATCGTCGG CGGCGCCATC AACGACACGC CTGTGACAGG CATGGTGGTA
CAGGCCAAAA ACTTTGGTGA CGAATACTGC GGTACGCCAT TCCCGGAAGG TACCTTTGAC
CTTCAGGATA GCGGCGGCAA TCCGGTCGAC GTGATTGTAG TTTGTAAGCG CAACAGCCTG
AGCGATCCCA ATGGTATCGC CCGTTCAGCC AAGGCCGATA ACATCAAGGC CGGTGGCGCC
GATGGCATGA TCATGTACAA CTATGCCAAC AACGATCCTC TCGTTGCTTT GGCCAAGTAC
TCTGTGCCAT CTATCCATAT CACCAAAGAA GAGTGGGATG GTCGCTACGA TAACGGCATG
GCGGGTTATG GCCTGAGTGA TTGGCTGGCC AAGGGCACAG ACCACATGTT GACCATAGGC
AGTACCCGCA TTGAGCGTGA GTTGAACGCG GAAAATGCGG ATTGGCTGGC GCCTTTCTCT
TCCCGTGGCC CAAGCCCATC AACCCCTGAA GCGCTGATCC CGGCCGTTGC CGCGCCCGGC
GTGGATATTT ACGCCGCCTT TGCCGACGAG CATCCGTTTA CAGCAGCCCC AGGCTCAGGT
GACTATGCTT TCCTGAGCGG TACCTCCATG GCTTCTCCCC ATGTAGCCGG TGCCATGGCG
CTGCTCAAAC AGGCTCAGCC TTCCTGGAGT GCCACTGAAA TCCAGTCAGC CCTGGCCATG
ACCGCTGAAA ACAAGGTGCA GTATCGCCGC CTCAACGAAG CGACCGGTGA TATTGAACTG
GCATCCACTT ACCGTGCCGG TACCGGCCGT ATCAACGTGG CCAACGCCGT GCAGGCCGGC
CTCATCATGG ATGAGACTGC CGATAACTTC CGCGCTGCCG ACCCACTCAA TGGCGGTACC
GTTCACAAGC TGAACACCCC TCAGCTGGTG AACTTCAGCT GCAAGCCAAA GTGTCAGTGG
ATCCGTACTG TAAAAGCGAC CAAAGATGGC AGCTGGTCTG TGACCCATGA TGATGTGGTG
AACTGGGCGT TTGATTCCCG CTCTCAGTCT GTTCAGAACG GCGTTAACAT CAAGGTCAGC
CCGAGTGAAT TCACCCTGGC AGCCGGTGAA ACCCAGACGA TAGTGATTGA AGCGTCAATC
ATGGATACCC AGGACTGGTT CTCCAACGCC GAAGTGGAGC TGCACTCCAA CCTGATCTTC
TCCGAGACCA GCGGCAAGGC ACCTGAGGCT CACTGGCCTG TGGTGTTCAA GTACGACATG
AACGACATGC CTGCCCGTTT GGCTGCTACT GCGCACCGTA ACGAAGGCAA CGCCGTTCTC
AAGGGCATTA AACTGCCCGA GGGTGACAAC ATCCATGGTC GTATCTTTGC GCCGGTGAAA
GCCGATGTGC AGACCCTGGT ACTGCCAAAG GATGACGACA ACTCTTTCCC ATGGAGCAGC
AATGCCGACA TGTCGGTGCC CATGGATCAG CGTTTGGATG AAGCCACTGC TACCGTGATG
ATTGACGTAC CGGCCAATGC CCGTCGTCTG ATCGTGGAGT CCTTTGGTAC CACTGAATCA
CCACTGGAAG GCAACTTCGA CAAGGGTAAC CTGCTGGTGT ACGTAGGTAA GGATTACAAC
GGCAATGGCC AGGCGGATCC GTTCGAGGAA TTGCTGTGTG TGTCCAACCA CATCACCTAC
AACAACTTCT GTAACATCAA TCAGCCGGAA GAGGGCCAAT ACTGGGCTGT GTTCTACAAC
CCACGCAAAG GTTCTGCCCA GAACAACTAC CATGATTTCC CGGAAGAAAC CTTCCAGTAT
GCGGCGACCG TGGTCGTCGA TGAGTTAGCC AATGGTTTGA CCGTGGATGT ACCAGTCAGT
AATGGCAAGG AACCTGTGGA TGTACAGGTT AACTGGGCTA TGCCTGAAAT GGTCGAAGGT
GATGTGTACT ACTCACTCAT CGACTTTGGT ACCTCAGTAG CCAATGCGGG CAACATAGGC
AAATCTGCAT TTAAACTGAC CCGTGGTAAG GATGATGTCA GCCTGAACGT GCCCCAGACC
GGTGCAAAAG AAGGTGATGT GATTCCGTTC ACCTTTACCG TGCTGCCCAA CGATTCGGGT
GCTGACCGTG CCTTTACCAT CAGCGCAGAT GTACCTGCTG ATCTGAGTCT GAGTGCCGAA
GATGTGTTGA CCTCGTCCAA AGCCATGGTG ACCGATATCA AACTGGAAAA CGGTAAGCTG
ACCATCAGCG GTGTTCAGCC CGATACCAGC GATTTGGCCC CTTCCTACAA TATTACTACC
AACGCTGACG ATGCCATGTG CCGTACGCCG GACTTTGGCA ACAGCAACCC CGGTGGTTAT
GTGAACCTGG AAGAGTTCCG CATCTACCCG ATCTTCAGTG GCTTTGCCCC TGTGGAATAC
GATGCCAATG GCCGTGCCAT CAGGGGTAAG GACAATGACA TCCTGACCCG CAACGGTATT
GTACTGCCTA TCGATCTGAT CTTCGGTGGC CGTTACGACA GTTTCCATCT GTACAACAAC
ACCGAAAACC TGAATGCCAG TCAGCAAAAC GCCCTGGATA TCCATGCCCA CGGCATAGTG
TCTCTGTGGG AAGGTCAGCC CTTCTTCTTC CCATACCATG ACATCTTCCC GTACAACAGC
TTCCCCTATG AAAGTATCGG TATGCTGTGG CGCGGTTATG GCCTGGCAGC GGATGCAACC
AAGGCCATTC TGGCCACCCC GCTGAATAAT GGTTTCGGTG ATAAATCCGG TATCAGTATC
GCCAGCACCC AAACCGGTTG GGCCATTCTG GAGTACGACA ATGCCCGCTC CTACCTGCCG
GCAGGTCGCG ATGCCAATCG TGTGTACCAG TGGCAGGAAA TGGATGACAG GTTCGACTTC
GAGCTGATCT TCAACGTCAA TACCCGCTTC GGTGACGGCG AGTACGAGAT GATGATGGCC
TATGACAACC TTAACTTCGA CGGTGATGGC CGTGGCTCCA TCGGTCTGCA GGGCTTCCGT
GGTGGTATTT ACCCTTACGG TCCGCTGGAA GGTTATAAGG GCGAGCTTGT AGCCTTCGAT
AACCTGGATG AGAAACTCGA AAACGGTCTG GTGATCTGTT ACGACTACCA GGGCCCTGAG
TCCTCTCAGT TCGAAGTAAC GGCATGGACC AAGGTCAAGC CAAGCGCAGC GGGTAAGACC
CTGGCCTTCA ACGCCGTAAG CCAGGTTGAA GGCATGGCCG ATATCGACAT CAGCCACGAG
ATCGCTGTAC CCGGCAATAT CACCATGGGT GCCATTGCCG ACCAGAGCGT GAACGAAAAC
ACCACGCTGG AAGGTATCGA AGTGCGCTAT GCCGACGAGC AAAACAGCGT TAACCAGATT
ACCGTGACCG GTGAACACAT CACCGCCACC GTATCCGGTA ACAGCTCTGG CAGCACCATC
AGTATCACGC CGGAAAAAGA TTTCCATGGT GAAGTGGAAG TGACAGTGAC TGTAAGTGAT
CTGGAAAACC CAAGTGATGC TGCTTCGACC AGCTTTATGC TGACCGTAGT ATCTGATGGT
GTTGAGCCAC AGCCTCCAGT GACGACTCAG CCTGAAACGC CAACCAGCAA CTCTGGTGGT
GGCAGCACGG GTCCTCTGGC ACTGATGATG TTGCTTGCTC TGGGTCTGCG CCGTCGCTTC
CTGTCAAAGT AA
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| Protein sequence | MYAAASLNVN EQHKLEPLKL TTEQIAQLQS GSPVTEDSLG HGEGLNIQIT PQSRRFEYEE
GLSGEHVYIV TLRDKPLANS GVGIQARSAK GGKGKLFVAG KPVSNEVAAY RSKLLSKQND
VLAAASAVVG HREVRAQFTN AVNGFSMAMT RDEAKRMSEV AGVATVRRAK TYELLSDAGP
ELIQANKIWD GSVTQSVPYK GENVIVGIVD TGVNTDHASF ADIGGDGYDH TNPWGAGNYV
GDCAKEGFET LCNDKLIGVR SYPVITDNFT SGVFGDTRPA VGEDYQGHGS HVASTAAGNV
LFDVPFSSPT PDAVSDGAII KEGLFPRISG VAPHANIVSY QVCHPSNDVG EFRGCPGEAL
IAGIEDAISD GVDVINFSIG GQDSHPWSDD VELAFLAARE AGISVAAAAG NSGQPVGYKE
YFGAIDHASP WLMNVAATTH DREVVIETKL TDPMGGNETP RWSEIVGGAI NDTPVTGMVV
QAKNFGDEYC GTPFPEGTFD LQDSGGNPVD VIVVCKRNSL SDPNGIARSA KADNIKAGGA
DGMIMYNYAN NDPLVALAKY SVPSIHITKE EWDGRYDNGM AGYGLSDWLA KGTDHMLTIG
STRIERELNA ENADWLAPFS SRGPSPSTPE ALIPAVAAPG VDIYAAFADE HPFTAAPGSG
DYAFLSGTSM ASPHVAGAMA LLKQAQPSWS ATEIQSALAM TAENKVQYRR LNEATGDIEL
ASTYRAGTGR INVANAVQAG LIMDETADNF RAADPLNGGT VHKLNTPQLV NFSCKPKCQW
IRTVKATKDG SWSVTHDDVV NWAFDSRSQS VQNGVNIKVS PSEFTLAAGE TQTIVIEASI
MDTQDWFSNA EVELHSNLIF SETSGKAPEA HWPVVFKYDM NDMPARLAAT AHRNEGNAVL
KGIKLPEGDN IHGRIFAPVK ADVQTLVLPK DDDNSFPWSS NADMSVPMDQ RLDEATATVM
IDVPANARRL IVESFGTTES PLEGNFDKGN LLVYVGKDYN GNGQADPFEE LLCVSNHITY
NNFCNINQPE EGQYWAVFYN PRKGSAQNNY HDFPEETFQY AATVVVDELA NGLTVDVPVS
NGKEPVDVQV NWAMPEMVEG DVYYSLIDFG TSVANAGNIG KSAFKLTRGK DDVSLNVPQT
GAKEGDVIPF TFTVLPNDSG ADRAFTISAD VPADLSLSAE DVLTSSKAMV TDIKLENGKL
TISGVQPDTS DLAPSYNITT NADDAMCRTP DFGNSNPGGY VNLEEFRIYP IFSGFAPVEY
DANGRAIRGK DNDILTRNGI VLPIDLIFGG RYDSFHLYNN TENLNASQQN ALDIHAHGIV
SLWEGQPFFF PYHDIFPYNS FPYESIGMLW RGYGLAADAT KAILATPLNN GFGDKSGISI
ASTQTGWAIL EYDNARSYLP AGRDANRVYQ WQEMDDRFDF ELIFNVNTRF GDGEYEMMMA
YDNLNFDGDG RGSIGLQGFR GGIYPYGPLE GYKGELVAFD NLDEKLENGL VICYDYQGPE
SSQFEVTAWT KVKPSAAGKT LAFNAVSQVE GMADIDISHE IAVPGNITMG AIADQSVNEN
TTLEGIEVRY ADEQNSVNQI TVTGEHITAT VSGNSSGSTI SITPEKDFHG EVEVTVTVSD
LENPSDAAST SFMLTVVSDG VEPQPPVTTQ PETPTSNSGG GSTGPLALMM LLALGLRRRF
LSK
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