Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0407 |
Symbol | |
ID | 4602662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 503863 |
End bp | 504747 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779743 |
Product | hypothetical protein |
Protein accession | YP_926287 |
Protein GI | 119773547 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAATT ACATAGCTCC GGTATTTCGT CCACCCTCTG AATGGCAATC GCTGATCCTC CAGGTGACCA ACGGCTGCAG CTACAACCGT TGCCGCTTTT GCGACATGTA CACCGCCGAG CAAAAGCGTT TCCGTGCCTT CAAAGAAGAT AAAATAGAAG CTGACCTGAA GCAGGCCGCT GCGTCAGGCG TGCCCATAAG GCGGGTGTTT CTGGCCGATG GTGACGCCAT GACGCTGCCA TTTTCCCGCC TGGAAGCCAT TCTGCTGCTC ATCCACAGAT ACCTGCCCGA TGTGAGCCGG ATAAGCAGTT ACTGCCTGCC TAGAAACCTC AGTAACAAAT CGGTGGAACA GCTTGTCCGC CTCAGAGAGC TTGGGCTCAG TCTCATGTAT GTGGGCTGTG AGAGCGGTGA TGACGAAGTG CTGGCCCGTG TCGAGAAGGG TGAAACCTTT GCGTCCTCTT TGGCGGCACT GGAGAAAATC CGCGCTGCCG GGATGAAGTC CTCGGTGATG ATCTTAACCG GCCTTGGTGG CATACACTTG TCGCAGCAAC ATGCCATTAA TTCTGCCCGG CTGATGAATG CCGCCCAGCC CGATTATTTG AGCACCTTGG TGGTTACGCT GCCCCTGGGA AAGGCACGCA TGGATGAGGG TTATGACAAG GACTTTCGCT TGCCGGAACA GCGAGGCCTG CTGGAAGAAA TGTATACCCT GCTCGCACAC CTTGAACTGT CGCAGACAGT GTTTCGATCG GACCATGCCT CGAATTATCT GGTGCTTAAG GGCATTCTGG GGCGGGACAA AGACAAGTTG CTGTCGCAGG TGCGTTTGGC GTTGGATTCT CCGGGCGCTG TGCCACTCAG GCAGGAATGG CAGCGGGGGC TGTGA
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Protein sequence | MLNYIAPVFR PPSEWQSLIL QVTNGCSYNR CRFCDMYTAE QKRFRAFKED KIEADLKQAA ASGVPIRRVF LADGDAMTLP FSRLEAILLL IHRYLPDVSR ISSYCLPRNL SNKSVEQLVR LRELGLSLMY VGCESGDDEV LARVEKGETF ASSLAALEKI RAAGMKSSVM ILTGLGGIHL SQQHAINSAR LMNAAQPDYL STLVVTLPLG KARMDEGYDK DFRLPEQRGL LEEMYTLLAH LELSQTVFRS DHASNYLVLK GILGRDKDKL LSQVRLALDS PGAVPLRQEW QRGL
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