Gene Sama_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0407 
Symbol 
ID4602662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp503863 
End bp504747 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content56% 
IMG OID639779743 
Producthypothetical protein 
Protein accessionYP_926287 
Protein GI119773547 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATT ACATAGCTCC GGTATTTCGT CCACCCTCTG AATGGCAATC GCTGATCCTC 
CAGGTGACCA ACGGCTGCAG CTACAACCGT TGCCGCTTTT GCGACATGTA CACCGCCGAG
CAAAAGCGTT TCCGTGCCTT CAAAGAAGAT AAAATAGAAG CTGACCTGAA GCAGGCCGCT
GCGTCAGGCG TGCCCATAAG GCGGGTGTTT CTGGCCGATG GTGACGCCAT GACGCTGCCA
TTTTCCCGCC TGGAAGCCAT TCTGCTGCTC ATCCACAGAT ACCTGCCCGA TGTGAGCCGG
ATAAGCAGTT ACTGCCTGCC TAGAAACCTC AGTAACAAAT CGGTGGAACA GCTTGTCCGC
CTCAGAGAGC TTGGGCTCAG TCTCATGTAT GTGGGCTGTG AGAGCGGTGA TGACGAAGTG
CTGGCCCGTG TCGAGAAGGG TGAAACCTTT GCGTCCTCTT TGGCGGCACT GGAGAAAATC
CGCGCTGCCG GGATGAAGTC CTCGGTGATG ATCTTAACCG GCCTTGGTGG CATACACTTG
TCGCAGCAAC ATGCCATTAA TTCTGCCCGG CTGATGAATG CCGCCCAGCC CGATTATTTG
AGCACCTTGG TGGTTACGCT GCCCCTGGGA AAGGCACGCA TGGATGAGGG TTATGACAAG
GACTTTCGCT TGCCGGAACA GCGAGGCCTG CTGGAAGAAA TGTATACCCT GCTCGCACAC
CTTGAACTGT CGCAGACAGT GTTTCGATCG GACCATGCCT CGAATTATCT GGTGCTTAAG
GGCATTCTGG GGCGGGACAA AGACAAGTTG CTGTCGCAGG TGCGTTTGGC GTTGGATTCT
CCGGGCGCTG TGCCACTCAG GCAGGAATGG CAGCGGGGGC TGTGA
 
Protein sequence
MLNYIAPVFR PPSEWQSLIL QVTNGCSYNR CRFCDMYTAE QKRFRAFKED KIEADLKQAA 
ASGVPIRRVF LADGDAMTLP FSRLEAILLL IHRYLPDVSR ISSYCLPRNL SNKSVEQLVR
LRELGLSLMY VGCESGDDEV LARVEKGETF ASSLAALEKI RAAGMKSSVM ILTGLGGIHL
SQQHAINSAR LMNAAQPDYL STLVVTLPLG KARMDEGYDK DFRLPEQRGL LEEMYTLLAH
LELSQTVFRS DHASNYLVLK GILGRDKDKL LSQVRLALDS PGAVPLRQEW QRGL