| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4009 |
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| Symbol | |
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| ID | 4598145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4231597 |
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| End bp | 4232319 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639778615 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_925193 |
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| Protein GI | 119718228 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGC CCGGCAGTCG CGTCGTCGTC GTCACCGGAG CCGCGTCCGG CATCGGGCAC
GCGACGGCGG CGCTGTTCCG CGACCTCGGC GACACCGTCT ACGGCCTGGA CCTCCGGCCG
ACCGTGCCCG ACGGCGTCAC CTACGTGGAG TGCAACGTCG GCGACCGGGC CTCGGTGCTC
GCCGCCGTCG AGACCTGCGC GGCCGACGGC CGGATCGACG TGCTGGCCAA TGTCGCCGGC
ATCGTCCAGT TCGGCCGGAT CGAGACGGTG ACCGAGGAGG AGTGGGACCG GGTCCACGCG
GTCGACCTCA AGGGCCCGTT CCTGCTGATC CAGGCCGCGC TGCCGCACCT GCGCGCCTGC
GGCGGCAACA TCGTCAACGT CTCGTCCGTC GCCGGCCACA AGGCGCAGCC CTACGCCACG
GCGTACGCGG CCGCCAAGGG CGGACTCACC CAGCTCACCC GCGCGCTCGC GCTCGAGCTC
GCGCCGGAGG GGATCCGGGT CAACGCGATC TGCCCGGGCA CCGTGGACAC GCCGATCGTC
GAGCAGGTCT TCCACAAGCT CACCGACGAC CTCGACACCC GGGTCGCCGA CCGGCTGATG
ATGATGCTGC CCGGCGGCGC GATCCGGCCC GACGAGATCG GCTCCGCGAT CGTCTACCTC
GCCTCGCCGC AGGCGCGGAT GATCACCGGC GAGATCCTGG CCTTCGACGG CGGGATGAGC
TGA
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| Protein sequence | MNQPGSRVVV VTGAASGIGH ATAALFRDLG DTVYGLDLRP TVPDGVTYVE CNVGDRASVL
AAVETCAADG RIDVLANVAG IVQFGRIETV TEEEWDRVHA VDLKGPFLLI QAALPHLRAC
GGNIVNVSSV AGHKAQPYAT AYAAAKGGLT QLTRALALEL APEGIRVNAI CPGTVDTPIV
EQVFHKLTDD LDTRVADRLM MMLPGGAIRP DEIGSAIVYL ASPQARMITG EILAFDGGMS
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