Gene Noca_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3700 
Symbol 
ID4597617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3926896 
End bp3928317 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content74% 
IMG OID639778308 
Producthypothetical protein 
Protein accessionYP_924887 
Protein GI119717922 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.296209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGGTC CGGGCGCGCA ACCGAGGTCA CGTGGCCTGT CTACCAGTCG GGCTGCCACG 
ATGGCGCCCA TGCCGGAGGC GCGCCAGCTG AACCTGACCC TGGACTTCTG TCTGCGGGTC
GGCGAGCTGC TGCTCTCCTC GGGAGCCGGT GCCGCCGACG TGACCGCCAC CATGCAGTCG
CTGGCCTGGC ACCTGGGCGT GCGGCACCCG GAGATCGACA TCACCTTCAC CTCGCTGTCG
ATGAGCTACC AGCGCGACCC CGAGGAGCCG GCGGCGGTGC TGCTGCGCCA CGTGAAGCAG
CGCGACATCG ACTACGAGGA CCTGACCCTG GTCGACCACC TGGTGCGCGA CGTGCTCCGC
GGCGAGGTCG ACCTCAAGGA GGCGCGCAGC CGCCTGGCCC GGATCGTCTC GTCGGGGCAC
CTGACGCCAC GCTGGGCGGT GACGCTCGGC TGGGGCGCGA TGTGCGCGGG GGTCGGCCTG
CAGCTGGGCG GCGGCCCGGT GATCGTGGCG GTCGCGTTCG TCGCCGCGGC GTGCATCGAC
CGGCTGCAGC TGCTGATGGC CCGGCGCCGG CTGCCGTTCT TCTACCAGCA GGTGGCCGGT
GGCGGCGTCG CGACGATCAT CGCCGTGCTG GCCGCCGTCG CCCTGCCCGG AGACCTCGAC
CCCTCGGTCG CGGTCACCGC GAACATCATC ATGCTGCTCG CCGGCATCGG GTTCATGGGT
GCGCTGCACG ACGCGCTGTC GGGGTTCTAC GTCACCGCCG GGGCGCGGCT CACCGAGGCG
CTGCTGGCGA CCGCCGGGAT CATCGCCGGC GTGAGCGGCG GCCTGACCCT CGCCGAGGTC
CTCGGTGTCG ACGTGGGGCG CCTGGACCCC GGGGCGGCCG CCGACCTCAA GACCCTCTCC
GTGATGGCGC TCGGCGCGGC GATCTGCGGC TCCGCGTTCG CGTTCGCGTC GTACGCCCCC
CGCCGTTCGC TCCTGCCGAT CGGTGCGGTC GCGGCCGTGG CGATCGTCAT CTCGGGCTCC
GGTGCCCTGG GCGGCCTCGG GCGGACCTGG CCGACCGCGC TGGCAGCGTT CTTCGTCGGC
CTGGTCAGCT ACACCGTCGC CGGCCGGATG CGGGTGCCAC CGCTGGTCGT CGTCGTCCCG
GCGATCGTCC CGATGCTGCC CGGCCTGTCG ATCTACCGGG GCCTGAGCCT GCTCACCGAG
GGCGGCGGGC AGACCTCGGA CGGGCTGCTC GCGATCATCA CCGCTGCGTC CGTGGCGATC
GCCCTCGCCT CGGGCGTGAT CCTCGGCGAG TACGTCGCCC AGCCGCTCAA GCGCGAGGCG
CACCGTCTGG AGAGCCGGTT GGCCGGGCCG CGGCTGGTCG GCCCGCTGCG CACCCGCACC
TCCCGGCGCG CCCGTCGCGG GGCCAAGGAC CGGGACGAGT AG
 
Protein sequence
MAGPGAQPRS RGLSTSRAAT MAPMPEARQL NLTLDFCLRV GELLLSSGAG AADVTATMQS 
LAWHLGVRHP EIDITFTSLS MSYQRDPEEP AAVLLRHVKQ RDIDYEDLTL VDHLVRDVLR
GEVDLKEARS RLARIVSSGH LTPRWAVTLG WGAMCAGVGL QLGGGPVIVA VAFVAAACID
RLQLLMARRR LPFFYQQVAG GGVATIIAVL AAVALPGDLD PSVAVTANII MLLAGIGFMG
ALHDALSGFY VTAGARLTEA LLATAGIIAG VSGGLTLAEV LGVDVGRLDP GAAADLKTLS
VMALGAAICG SAFAFASYAP RRSLLPIGAV AAVAIVISGS GALGGLGRTW PTALAAFFVG
LVSYTVAGRM RVPPLVVVVP AIVPMLPGLS IYRGLSLLTE GGGQTSDGLL AIITAASVAI
ALASGVILGE YVAQPLKREA HRLESRLAGP RLVGPLRTRT SRRARRGAKD RDE