| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2845 |
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| Symbol | ligB |
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| ID | 4598444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3014222 |
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| End bp | 3015751 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639777450 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_924034 |
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| Protein GI | 119717069 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGGAG CCGTGCTGAT CGCCGACGTC GTCGCCACCT CCGCGGCGAT CACGGCGACC
CGGTCCCGCA AGGCCAAGGT CGCCGCGATC GCCGACCTGC TCGCGCGCGC CGACCCGCGC
CGGTCCGGCG CCGACGAGCT CGAGACCGTC ACCGCGTACG TCGGCGGCGC GCTGCGCCAG
CGCCGCACCG GCCTCGGCTG GCGCGGGCTC ACGAAGTTGC CCGCCCCGGC GCCCGGTCCC
ACGCTGAGCG TGCTCGAGGT CCACGAGGCG TTCGAGCGGA TCGCCGCCCC GGCCGGCGCC
GGCTCGCAGG CCGCCCGAGC CGCCGCGGTG GCCGACCTGT TCGGCCGGGC CACCGCCGAG
GAGCAGCAGT GGCTGCGCGG AGTGGTGACC GGCGAGGTGC GCCAGGGCGC GCTCGACTCG
CTGGTCCAGG AGGGGCTGGC CGCGGCCGCC GGCGTACCCC TCCCCGAGGT GCGGCGGGCC
GCGATGCTCG CCGGCTCGAC GGTCGCCGTC GCCGCTGCGG CGTTCGAGGG GGTCGCGGCG
CTCGGGGCCG TGGGCCTGCA GGTCGGCCGC CCGGTGCTGC CGATGCTCGC GTCCAGCGCG
CCGGACCTGG CCGCCGCCCT GGCCAGGGCC GGTGGTGATG AGGTGGCCGT CGACACCAAG
CTCGACGGGA TCCGGATCCA GGTGCACCGC TCGGGCCCCG ACGTGGTCGT GGCCACCCGG
TCGCTGGAGG ACATCACCGC CCGGCTCCCC GAGGTCGTCG AGGTCGCCCG CGCGCTGCCG
GCCGACTCGT TCGTGCTGGA CGGCGAGGCG CTCGCGCTGG CCGAGGACGG CCGGCCGCGC
CCGTTCCAGG AGACCGCCGC ACGCACCGCG ATGGGGGCAG GCGTCGAGGT GACGCCGTAC
TTCTTCGACG TGCTGCACCT GGACGGCGCC GACCTGCTCG ACGTGTCCGC TGCCGAGCGC
GCGGCTGTGC TGGAACGGCT CGTGCCGGCC GAGCACCGGG TGCCGCGCGT GGTCACCGCC
GACCTCGGCG TGGCCGAGGA GTTCCTTGCC GGCGCGCTGC GCTCGGGCCA CGAGGGCGTC
GTGGTCAAGA GCCTGGCCGC GCCCTACGAG GCCGGCCGTC GCGGCGCGTC CTGGGTCAAG
GTCAAGCCGG TGCACACCCT CGACCTGGTC GTCCTCGCGG TCGAGTGGGG CTCGGGCCGG
CGGCAGGGGT GGCTCTCCAA CATCCACCTC GGCGCCCGCG ACCCGGCCAC CGGAGGGCTG
GTGATGCTCG GCAAGACGTT CAAGGGGATG ACCGACGAGG TGCTCGCCTG GCAGACCGAG
CGGTTCCTCG AGCTCGAGAC CTCGCGGTCC GCCCACGTCG TGCACGTGCG GCCCGAGCAG
GTCGTCGAGA TCGCCTTCGA CGGGGTGCAG CGCTCGACCC GCTACCCCGG CGGTGTCGCG
CTCAGGTTCG CGCGCGTGCT GCGCTACCGC GACGACAAGC CGGTCGCCGA GATCGACACC
GTCGACACGG TGCGCTCGTT CCTGGGGTGA
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| Protein sequence | MNGAVLIADV VATSAAITAT RSRKAKVAAI ADLLARADPR RSGADELETV TAYVGGALRQ
RRTGLGWRGL TKLPAPAPGP TLSVLEVHEA FERIAAPAGA GSQAARAAAV ADLFGRATAE
EQQWLRGVVT GEVRQGALDS LVQEGLAAAA GVPLPEVRRA AMLAGSTVAV AAAAFEGVAA
LGAVGLQVGR PVLPMLASSA PDLAAALARA GGDEVAVDTK LDGIRIQVHR SGPDVVVATR
SLEDITARLP EVVEVARALP ADSFVLDGEA LALAEDGRPR PFQETAARTA MGAGVEVTPY
FFDVLHLDGA DLLDVSAAER AAVLERLVPA EHRVPRVVTA DLGVAEEFLA GALRSGHEGV
VVKSLAAPYE AGRRGASWVK VKPVHTLDLV VLAVEWGSGR RQGWLSNIHL GARDPATGGL
VMLGKTFKGM TDEVLAWQTE RFLELETSRS AHVVHVRPEQ VVEIAFDGVQ RSTRYPGGVA
LRFARVLRYR DDKPVAEIDT VDTVRSFLG
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