| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2574 |
|---|
| Symbol | |
|---|
| ID | 4598431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2740788 |
|---|
| End bp | 2742050 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639777180 |
|---|
| Product | phosphoserine phosphatase |
|---|
| Protein accession | YP_923765 |
|---|
| Protein GI | 119716800 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase
[COG3830] ACT domain-containing protein |
|---|
| TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.335719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCGG CCGCCGCGAT AGCCTCGGCG ACTGACATGA CTAACGCGCA GGCCGGCCGC
AAGCCGGAGA CCCTCCTCAT CACGCTGACC GGCAAGGACC GCCCCGGCGT GACGTCCTCG
GTGTTCGCCA CGCTCTCCGG GGCCGGCGTG GAGGTCGTCG ACATCGAGCA GATCGTGCTG
CGCGGCCGGC TCATCCTCGG CGTCCTCGTC ACCGCACCCC ACCACCCGCG CCGGGTGACG
GAGGCGGTCC AGGAGACTGC GGCGGCCCTC GGCATGAGCG TGGACGTCGA GCGGGGCGTG
GGCGACAACA AGGCGCGGCG GGGCGGCCGC TCGCACGTGA CGATCATCGG CTCCCCGCTG
CGAGCTGCGG CGATGGGCGC GATCGCCGGC CGGATCGCCG ACGCCGGCGC CAACATCGAC
CGGATCGAGC GGATGGCCCG CTACCCGGTC ACGGCGATCG ACCTGCACGT CTCCGGGGTC
GACACCGCGG CGCTGCGCAC CGTGCTCGCA GCCGAGGCGT CCCGGCAGGG CGTCGACATC
GCGGTGCAGC CGGCGAACCT CCTGCGGCGA GGTGCCCGCC TGATCGTGAT GGACGTCGAC
TCCACCCTGA TCCAGGGCGA GGTGATCGAG ATGCTGGCCG CGCACGCCGG GTGCGAGGCG
GAGGTCGCGC GGGTCACCGA GGCCGCGATG CGCGGTGAGA TCGACTTCGA GGCCTCGCTG
CGAGCGCGAG TGGCCCTGCT CGAAGGAGTC CCGGCGAGCG CGCTCGACGA GGTGTACGAC
GCCATCCTGC TCGCCCCCGG CGCGCGCACG ATGGTGCGCA CCCTGCGCCG GCTCGGCTAC
CACTTCGCGA TCGTCTCCGG AGGGTTCAGC CAGATCACCG ACCGGCTGGC CACCGACCTC
GGCATCGACT ACTCCCGGGC CAACGAGCTG GAGATCGTCG ACGGACGCCT GACGGGCCGG
ATCGTCGGTC CGGTCGTCGA CCGCGCCGGC AAGGCCGCTG CGCTGCGGGA GTTCGCGGCC
ACCGCGGGCG TCGCGGAGGC CGCGGTGATC GCCATCGGCG ACGGCGCCAA CGACCTGGAC
ATGCTCAACG CGGCGGGCCT CGGCATCGCC TACAACGCGA AGCCGCTGGT GCGCGACGCC
GCCGACACCG CGGTGAACGT GCCCTACCTC GACGCGATCC TCTATCTCCT CGGCATCTCC
CGCGAGGAGA TCGAGGCCGC CGACGCCGAG GCGGGCTTCG TCACCCCGGC ACCGCCGGTC
TGA
|
|---|
| Protein sequence | MRSAAAIASA TDMTNAQAGR KPETLLITLT GKDRPGVTSS VFATLSGAGV EVVDIEQIVL
RGRLILGVLV TAPHHPRRVT EAVQETAAAL GMSVDVERGV GDNKARRGGR SHVTIIGSPL
RAAAMGAIAG RIADAGANID RIERMARYPV TAIDLHVSGV DTAALRTVLA AEASRQGVDI
AVQPANLLRR GARLIVMDVD STLIQGEVIE MLAAHAGCEA EVARVTEAAM RGEIDFEASL
RARVALLEGV PASALDEVYD AILLAPGART MVRTLRRLGY HFAIVSGGFS QITDRLATDL
GIDYSRANEL EIVDGRLTGR IVGPVVDRAG KAAALREFAA TAGVAEAAVI AIGDGANDLD
MLNAAGLGIA YNAKPLVRDA ADTAVNVPYL DAILYLLGIS REEIEAADAE AGFVTPAPPV
|
|---|
| |