Gene Noca_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2219 
Symbol 
ID4598717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2366740 
End bp2367180 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID639776819 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_923412 
Protein GI119716447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCCG GACTCGACCC CTCAGTGCTG CGCGCCGCCC GCGAGAAGGC GGGCCTGACC 
CAGCATGAGT TGGCGCGTCT AGTTGGTGCC GCCGGTGGGG AGCGCATATC TCGTTGGGAG
CTGGGCGCGT CGGTTCCTCG ACCGGACTTC TTGGTCAAGC TTGCTAGAGC GCTCGACATC
CCGACCCTTC GTCTAATTCA CACGGAGGGT GAGGTTCCTG ATCTCAGAGC ACTGCGCTTG
AAGGCGGGGC TGACGGTGCC CGAGTTGGCT GCGGCCGTCA ACGTGGCTGT GCCGACCTAC
TACGCCTGGG AGCAGGGCCG TTGGACCAGA CTCCCAGCAG CCAGGCAGCT TGAGAGTCTC
GCGCGTGGGT TGGGGGACAC AGTCGACGTC GTCGCCGCGG CCTTCCAGGA AGCCCGGCAG
CAGCGTCTGC GGCGCGGGTA G
 
Protein sequence
MVSGLDPSVL RAAREKAGLT QHELARLVGA AGGERISRWE LGASVPRPDF LVKLARALDI 
PTLRLIHTEG EVPDLRALRL KAGLTVPELA AAVNVAVPTY YAWEQGRWTR LPAARQLESL
ARGLGDTVDV VAAAFQEARQ QRLRRG