Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1858 |
Symbol | |
ID | 4597178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1982715 |
End bp | 1983629 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639776457 |
Product | hypothetical protein |
Protein accession | YP_923056 |
Protein GI | 119716091 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAAGC GAACCTCGCG CTGGGCGCTG GCGGCTTTCG CGGTCGTCGG CTTCATCTGG GGCAGCAACT TCTTGTTCAT GAAGTGGGCG GCCGAGGAGA TCTCGCCGCG TCAGATAGCG CTCCTGCGGG TCGCCTTCGG ACTTCTCCCG GTGCTCGCGC TCGGCCTGGC GAGACGGGAG TTCCGCCGCT GGCACCTGCG GCACACGGTC CACTTCGCGG TGATGGGCGT GCTCGCCACG AGCCTGTACT ACGTGCTCTA CGCGGCCGGT ACCGAGCGGC TCCCCTCAGG GCTGGCGGGC GCTCTGAGCG GCGCCATCCC GCTGTTCGCG TTCATGGTCG GCGCGGTCGC CCTGCCGACC GAGCCGATGA CGCCGCGCCG GGTCCTCGGG GCCTTCCTGG GACTCGCCGG CGTGGTGATG ATGGCCCGCC CGTGGAACGT GCACGGGAGC GTCGATCCCG TGGGGGTCCT GCTGATGGTC ACCGGCTCCG CCTGCGTCGG CGCCTCCTTC GTCTACACCC GGCGCTTCAT CACCGGCCTC GACATCCCGC CGACCGCCCT CACGACGTAC CAGATGGCGC TCGGCCTGGT CGCGCTCCTG CCCCTCACCG ACCTCCACGG GATCGGAGCG ATCCGTGGCG ACCACCGCGC GCTCGTGGGT CTCGTCCTCG GCCTCGGGCT GGTCGGCACA GGCCTGTCCT ACGTAATCTT CTACTACCTC ATCGCCGAGC TCGGTGCAGC AACTGCGTCC GCGGCCTCGT ACCTGCCCCC GGTGGTCGCG CTAGCGATCG GGTGGATCGG CCTCGGCGAG CCGCTGCGCC ACGCCGACCT TGCCGCGGTG GCGCTGATCC TGCTAGGCGT GGCGATCATC CGGGCCGGCG CCCGCACGTA CCGGGCCGAG CGCGGAACCC AGTGA
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Protein sequence | MSKRTSRWAL AAFAVVGFIW GSNFLFMKWA AEEISPRQIA LLRVAFGLLP VLALGLARRE FRRWHLRHTV HFAVMGVLAT SLYYVLYAAG TERLPSGLAG ALSGAIPLFA FMVGAVALPT EPMTPRRVLG AFLGLAGVVM MARPWNVHGS VDPVGVLLMV TGSACVGASF VYTRRFITGL DIPPTALTTY QMALGLVALL PLTDLHGIGA IRGDHRALVG LVLGLGLVGT GLSYVIFYYL IAELGAATAS AASYLPPVVA LAIGWIGLGE PLRHADLAAV ALILLGVAII RAGARTYRAE RGTQ
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