Gene Noca_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1858 
Symbol 
ID4597178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1982715 
End bp1983629 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID639776457 
Producthypothetical protein 
Protein accessionYP_923056 
Protein GI119716091 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAAGC GAACCTCGCG CTGGGCGCTG GCGGCTTTCG CGGTCGTCGG CTTCATCTGG 
GGCAGCAACT TCTTGTTCAT GAAGTGGGCG GCCGAGGAGA TCTCGCCGCG TCAGATAGCG
CTCCTGCGGG TCGCCTTCGG ACTTCTCCCG GTGCTCGCGC TCGGCCTGGC GAGACGGGAG
TTCCGCCGCT GGCACCTGCG GCACACGGTC CACTTCGCGG TGATGGGCGT GCTCGCCACG
AGCCTGTACT ACGTGCTCTA CGCGGCCGGT ACCGAGCGGC TCCCCTCAGG GCTGGCGGGC
GCTCTGAGCG GCGCCATCCC GCTGTTCGCG TTCATGGTCG GCGCGGTCGC CCTGCCGACC
GAGCCGATGA CGCCGCGCCG GGTCCTCGGG GCCTTCCTGG GACTCGCCGG CGTGGTGATG
ATGGCCCGCC CGTGGAACGT GCACGGGAGC GTCGATCCCG TGGGGGTCCT GCTGATGGTC
ACCGGCTCCG CCTGCGTCGG CGCCTCCTTC GTCTACACCC GGCGCTTCAT CACCGGCCTC
GACATCCCGC CGACCGCCCT CACGACGTAC CAGATGGCGC TCGGCCTGGT CGCGCTCCTG
CCCCTCACCG ACCTCCACGG GATCGGAGCG ATCCGTGGCG ACCACCGCGC GCTCGTGGGT
CTCGTCCTCG GCCTCGGGCT GGTCGGCACA GGCCTGTCCT ACGTAATCTT CTACTACCTC
ATCGCCGAGC TCGGTGCAGC AACTGCGTCC GCGGCCTCGT ACCTGCCCCC GGTGGTCGCG
CTAGCGATCG GGTGGATCGG CCTCGGCGAG CCGCTGCGCC ACGCCGACCT TGCCGCGGTG
GCGCTGATCC TGCTAGGCGT GGCGATCATC CGGGCCGGCG CCCGCACGTA CCGGGCCGAG
CGCGGAACCC AGTGA
 
Protein sequence
MSKRTSRWAL AAFAVVGFIW GSNFLFMKWA AEEISPRQIA LLRVAFGLLP VLALGLARRE 
FRRWHLRHTV HFAVMGVLAT SLYYVLYAAG TERLPSGLAG ALSGAIPLFA FMVGAVALPT
EPMTPRRVLG AFLGLAGVVM MARPWNVHGS VDPVGVLLMV TGSACVGASF VYTRRFITGL
DIPPTALTTY QMALGLVALL PLTDLHGIGA IRGDHRALVG LVLGLGLVGT GLSYVIFYYL
IAELGAATAS AASYLPPVVA LAIGWIGLGE PLRHADLAAV ALILLGVAII RAGARTYRAE
RGTQ