Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1019 |
Symbol | |
ID | 4599680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1070611 |
End bp | 1071789 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639775618 |
Product | histidine kinase, dimerisation and phosphoacceptor region |
Protein accession | YP_922225 |
Protein GI | 119715260 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.181556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCAGT TCCGGCGGCA GCTCTCGACG TACGGTCTCG ACGCCCTCCT CGACGCCCTC CTCGGCGTGG CCGCCGTGTG GAGTGCCGTC GGCACCCTGC GCCGCGACGA TCGGTACCTC CCGGCCGGGG CCGCGGCGTG GTGGGAGGCC GCGGCGATCG CCGCGATCAT CCTCGTCCTC GTGCTGCGCC GTCGGTTCCC GTTCGGTGCG CCTGCCGGTG TCTGGCTGAC GTGTGCGGCG CTCTCCTTCG CCGACGGGCG GATGATCCCC AGCCAGGCCG GCCTCTTCGT CGCCGGGCTC GGCGCCGCGC TGCTTCTCGG CAACCAACGC AACGGAGTGC AGGCGCGGGT CGGCCTGGCC ATCGTGGTCG GCAGCGGCGC GATCGTCATG TACAACGACC CCACGCACTC GTCCGGTGCC CTGGTCTCCA CTCCGCTGCT GTTCGCGATG GCCTGGCTGG TCGGCTACGC GCTGCGCGAG CGCACCGAGC GGACCGAGGC CGCGGAGGAG CGCGCCGCTC GTGCCGAGCG CGACCGCGAG GTGGCGGCGC GCGTGGCCGT GGCGGAGGAG CGCGGCCGGA TCGCGCGGGA GCTCCACGAC GTCGTGGCGC ACGCGGTCAG CGTGATGGTC CTCCAGGTCG GCGCCGTCCG GCACCGGATG TCCGACTCCG ACGCGGAGAA CCGCGAGGCG CTCGAGAACG TCGAGCGGGC CGGGCGGGCC GCCCTCGCCG AGATGCGCCG CCTGCTCGGG GCGATGCGGC GCGACGGCGA GCAGCCCGAG CTGGTGCCGC ATCCGGGCCT GGCCGACCTG GACAGCCTGC TCGCGGACGT GCGGGCTGCC GGGCTGCCCG TCCGGCTGCA GGTCCACGGC GAGCCGGTCG AGCTGCCGCC GGGGCTCGAT CTCTCGGCGT ACCGCATCGT GCAGGAGGCC ATCACCAACA CCCTCAAGCA CGCCCGGGCG CACCGCGCGG ACGTGGACGT GTACTACGAG CCCCACGACC TTCGGGTGGA GGTCCGCGAC GACGGCCGGG GCTCGACGTC CGGTGCTGGG CTGGGGCACG GGCTGGTGGG CCTGCGCGAG CGGGTCAAGA TCTACGGCGG GGAGATGACG GCGGGCCGAG GTCCTGCCGG AGGGTTCGCG GTGCGCGCAC GGCTTCCGTT GGACGGTGAC GGGTCATGA
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Protein sequence | MSQFRRQLST YGLDALLDAL LGVAAVWSAV GTLRRDDRYL PAGAAAWWEA AAIAAIILVL VLRRRFPFGA PAGVWLTCAA LSFADGRMIP SQAGLFVAGL GAALLLGNQR NGVQARVGLA IVVGSGAIVM YNDPTHSSGA LVSTPLLFAM AWLVGYALRE RTERTEAAEE RAARAERDRE VAARVAVAEE RGRIARELHD VVAHAVSVMV LQVGAVRHRM SDSDAENREA LENVERAGRA ALAEMRRLLG AMRRDGEQPE LVPHPGLADL DSLLADVRAA GLPVRLQVHG EPVELPPGLD LSAYRIVQEA ITNTLKHARA HRADVDVYYE PHDLRVEVRD DGRGSTSGAG LGHGLVGLRE RVKIYGGEMT AGRGPAGGFA VRARLPLDGD GS
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