| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0948 |
|---|
| Symbol | |
|---|
| ID | 4597481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 997118 |
|---|
| End bp | 997990 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639775551 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_922158 |
|---|
| Protein GI | 119715193 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00710468 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACCA CCGCGATTCC CTCGGGGACC GTCGTCGTCG GCCTGGACGG CTCGCCGTCG
GCCGAGCGCG CCCTCGAGTG GGCGATCGAC CAGGCGCTGC TGGAGTCTCG CCAGCTGACC
CTGGCCCACG GCGTGGACCC CTCCGGTTCC GTCTGGGTCG ACCCGGCCGC CATCGACCAC
CGGGCGGTGC TCGAGGCCCT GCAGGCCGAC GCCGAGGTGA TGCTCGACCA CGCCCGCGAG
CAGGTCGCGA GGCGGGCCCC CGACCTCGTG GTGCACCAGG TCATCCGGAT GTCCGACGCC
CGGGTCACCC TGCTCGAGCT CTCCGGCCAG GCGGCGATGG TCGTCGTCGG CTCCCGTGGT
CGCGGACCGA TCAAGACCCT GCTGCTCGGC TCGGTGAGCC TCGCGGTCTC CCGGGAGGCG
CTCTGCCCCG TGGTGGTGCT GCGACCGGGT CACCCCGGCG TGGTCCGCAA CGGCGTGCTG
GTCGGCGCCG ACGGGACCGA CCGGTCCCTG GCCACGCTGG AGTTCGCCTA CCGGCAGGCC
TCCTTGCACC GGCTTCCGCT GACGATCATG CACTGCTTCT GGGACGCCCG GCCGGCCACC
GAGGGGGAGC CGGTCGCCAG CGACGTCCGG CTGGTGCTCG CCGAGTCGCT CGCCGGACTG
GGCGAGAAGT TCCCAGACGT CCAGGCGCGG ACCGAGCTGG TGCGGGGGAT GGCCGACGAG
CGCTTGGTGC GGGCCTCGCA GCGGATGGAC CTGGTCGTGG TCGGCGCCCA TCACGGCGGC
ACGCTGACGA CCCTGCTCTA CGGGTCGATC GCGAACGCGG TGCTGGAGCA CGCCACCTGC
CCGGTCGCGA TCGTCCCGGA GTCGGAGGGC TGA
|
|---|
| Protein sequence | METTAIPSGT VVVGLDGSPS AERALEWAID QALLESRQLT LAHGVDPSGS VWVDPAAIDH
RAVLEALQAD AEVMLDHARE QVARRAPDLV VHQVIRMSDA RVTLLELSGQ AAMVVVGSRG
RGPIKTLLLG SVSLAVSREA LCPVVVLRPG HPGVVRNGVL VGADGTDRSL ATLEFAYRQA
SLHRLPLTIM HCFWDARPAT EGEPVASDVR LVLAESLAGL GEKFPDVQAR TELVRGMADE
RLVRASQRMD LVVVGAHHGG TLTTLLYGSI ANAVLEHATC PVAIVPESEG
|
|---|
| |