Gene Tpen_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1111 
Symbol 
ID4601105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1049376 
End bp1050287 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content60% 
IMG OID639773888 
Producthypothetical protein 
Protein accessionYP_920513 
Protein GI119720018 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTATGC TCGCCGCGTT GATCACTGTC TGCGTTATTC TCCCCGCGGG TAGCGTCCCG 
GTTAACTCCG TGGCGATCAC GATTCTCCCT ACTGGCGTCG CGAAAGTAGA CTACTCCGTG
AGCGTTGGTA ACGCCTCCCT GCTAGACATA CAGCTCGTCG GAACCCCCCT CCCCGAGTAC
GGCGTCGTCG TAGTCGACGA GCACGGTACA CCTCTAGCCT ACATGGTTAA CGAGACCACC
GGTACCATGA GGATAATCAC CCTGGGCTCC TCTCTCGTCT CGATAAGCTA CTTCACGAGT
AGCATACTCT CCATGAGTAA AGGCGTTTGG ACTGTTAGCT ACGTGTCCCC CCTCCCGAGC
ACGGTACGGC TACCGGCCGG CACAGCCCTG TCATCCCTCT CAACGGTTCC CACTTCCGTC
ACGGTGCAGA ACCAGTCGCT CGTACTGAGC TTCCAGCCGG GCAGGGTCAG CTTTTCCTAC
GTCTACGTGC CCCAGCAACC GCCACAACAA GCCCCTCCGC AGACCTCGCA ACCTTCACGG
GTAAACGCCT CGCAACCTGC ATCTCAACCC CAGCCCACGC CGAGCCCCCA GCAACCAGCC
CCGGCTAAGA CCACGCCTTC TGGTATGCCC ATAGAGCCTC TCTACATAGC CGTCCTGGGG
GCCGCGGGGG CGGCTGTCGT GCTAGCCCTC CTCCTGAAGG CGCGCGGGGG GCGGGAGCTG
GGAGAGGAGG ACGAGGAGAT AATAGGGGTT CTGAAGAAGC TTGGTGGAGG AGCCTTCCAG
TCGGACATAG GGCTCTACGT GAGCCTACCG CCTACCACGC TTTGGAGGAG GATAAGGAGG
CTGGAGAAAC TGGGCTACGT GAAGATAGAG AAGAAAGCCG GGAGGAACTT CGTAAGGCTG
GTTAAAGGTT GA
 
Protein sequence
MVMLAALITV CVILPAGSVP VNSVAITILP TGVAKVDYSV SVGNASLLDI QLVGTPLPEY 
GVVVVDEHGT PLAYMVNETT GTMRIITLGS SLVSISYFTS SILSMSKGVW TVSYVSPLPS
TVRLPAGTAL SSLSTVPTSV TVQNQSLVLS FQPGRVSFSY VYVPQQPPQQ APPQTSQPSR
VNASQPASQP QPTPSPQQPA PAKTTPSGMP IEPLYIAVLG AAGAAVVLAL LLKARGGREL
GEEDEEIIGV LKKLGGGAFQ SDIGLYVSLP PTTLWRRIRR LEKLGYVKIE KKAGRNFVRL
VKG