| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0090 |
|---|
| Symbol | |
|---|
| ID | 4601058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 70840 |
|---|
| End bp | 71190 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639772844 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_919503 |
|---|
| Protein GI | 119719008 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2522] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.592947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATATA GTACTACGAG CGAGATGGCG CACCTTAAGG CTCCCTGCGA AGAGATAAGC
AGAAGAGTAC TCCCGGCCGT GAGGAGTATA CTTGTAAGGT ATCTTTACGA GCAAGAAGGC
TTAACCCAGC TTCAAATAGC CAAGTTACTG GGGATCAGCC AGTCGAGCGT GAGCAGGTAC
CTTAACAGCC AGAGAGGTCT CTCTCAAAGA GATATACTGG AGATACCCTC TATAGACGAA
AAACTCAGGG AGACTGTACA CGGCATCGTA GAGGGCAAGC TAAGAGGAGA GGAGGCTTTG
TGTAGCATAT GCCAGTACAT CAGGATGATG AGCCGCGAAG TTTCCGGGTA A
|
|---|
| Protein sequence | MSYSTTSEMA HLKAPCEEIS RRVLPAVRSI LVRYLYEQEG LTQLQIAKLL GISQSSVSRY
LNSQRGLSQR DILEIPSIDE KLRETVHGIV EGKLRGEEAL CSICQYIRMM SREVSG
|
|---|
| |