Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5038 |
Symbol | |
ID | 4583599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 550003 |
End bp | 551244 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639772341 |
Product | capsule polysaccharide export protein-like |
Protein accession | YP_918794 |
Protein GI | 119387760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3524] Capsule polysaccharide export protein |
TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCAAC CCGCCGCGAA GCCGGCCCCG AAACCTGCCG CGAAGCCCGC CGCAAAGCCT CTGGCCCGGG TCCGGCCCCA GCAGCCGGCC GCCGCCCCCG ACCAGCCGGT GCGCCCGACC GTCGGCATCG CCGAGCCGCG CCGCCGGCAC TGGCTGATCC TGGGCTCGTT CCTGGCGCTG GTGCTGCTGC CCAGCCTGCT CTGGGCCGCC TATCTCTGGC TGCGCGCCGA GGACCAGTAT GTCTCGACCG TCGGCTTCTC GGTGCGCAAG GAACAGTCCA CCCCCTCGAT CGACCTGCTG GGCGGGCTGG CGCCGCTGGC CGGCGGCGCC AGCGCCTCGG ACACCGACAT CCTCTACGAA TACATCCGCA GCCAGGACAT GGTCGAAAGG ATCGACGCCC GGCTCGACCT GCGCGCGCGC TTCTCGGGGC CTTGGCCGCA TGACTTCGTC TTCGCCTTCG ACCCCGAGGG CCATGTCGAG GACCTGACCG ACTACTGGCA GCGCCAGGTC AAGGTGCTCT ACGACAGCAC CACCCAGCTG ATCACGCTGA AGATCAGCGC CTTCACCGCC CGGGACGCGC AGGAGATCGC CGCGGCGGTG TTCCAGGAAA GCTCGGACAA GATCAACCAG CTCTCGACCA TCGCCCAGGA CGACGCCACC CGGCTGGCCA AGGCCGAGCT GGACAAGGCC CGCGCCGAGC TGACCGAGAC CCGCCAGGCG ATGACCGCCT TCCGCATGCG CTCGCAGATC GTCGATCCCG AGGCGGACCT GGCCGGGCAG ATGGGGGTGC TGAGCGGGCT GCAGGCGCAG CTGGCCGAGG TGCTGGTCGC CCACGACCTG CTTCTGGACA ACGCCCAGCC CACCGACCAC CGCGTCACCC AGTCGCAGCA GAAGATCGAC GCCCTGCGCC GGCTGATCGA CGCCGAGCGC GCCAAGTTCG GCGCCGAGGG CAAGGGACCG GCGGGCGAGA GCTATGCCCA GCTGATGGCC GAATACGAAA AGCTGGCCGT GGACCGCGAA TTCGCCGAGG GCGCCTATCG CTCGGCCCGC ATCGCCCATG AGACGGCGCT GGCCGAGGCA CAGCGCCAGG CGCGCTACCT GGCCGCCCAT ATCGAGCCCA AGGTGGCGCA AAGCGCGACC GAGCCGAACC GGCCCTGGCT CTGGGCGATG ATCACCGGCA TGCTGCTGGC GGGCTGGTCG ATCCTGGTGC TGATCTATTA CAGCGTCCGC GACCGCCGCT AG
|
Protein sequence | MAQPAAKPAP KPAAKPAAKP LARVRPQQPA AAPDQPVRPT VGIAEPRRRH WLILGSFLAL VLLPSLLWAA YLWLRAEDQY VSTVGFSVRK EQSTPSIDLL GGLAPLAGGA SASDTDILYE YIRSQDMVER IDARLDLRAR FSGPWPHDFV FAFDPEGHVE DLTDYWQRQV KVLYDSTTQL ITLKISAFTA RDAQEIAAAV FQESSDKINQ LSTIAQDDAT RLAKAELDKA RAELTETRQA MTAFRMRSQI VDPEADLAGQ MGVLSGLQAQ LAEVLVAHDL LLDNAQPTDH RVTQSQQKID ALRRLIDAER AKFGAEGKGP AGESYAQLMA EYEKLAVDRE FAEGAYRSAR IAHETALAEA QRQARYLAAH IEPKVAQSAT EPNRPWLWAM ITGMLLAGWS ILVLIYYSVR DRR
|
| |