Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4714 |
Symbol | |
ID | 4583217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 202820 |
End bp | 203488 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639772018 |
Product | phosphoribosyltransferase |
Protein accession | YP_918471 |
Protein GI | 119387437 |
COG category | [R] General function prediction only |
COG ID | [COG1926] Predicted phosphoribosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.120595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00895414 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGATCGCAA GGGGGACGGC GATGTTCGCA GATCGCACGG ATGCCGGACG CCGGCTTGGC GCCGCACTTT CCGGGCGCCG GGGCGGGTCC GTCCTGGTGC TGGCGCTGCC GCGCGGCGGC GTGCCGGTCG GGCTTGAGGT CGCAAGGGCC CTGGATGCGC CGCTGGATGT CCTTCTGGTC CGCAAGATCA CGGCGCCCGC GCATCCCGAA CTGGCCATCG GCGCCGTCGT GGACGGCAGC ACGCCGCAAC TGCTGCTCGA CGACCAGCTC GTCGCCGCGA CAGGCGCGAC GGCCGAACAT ATCGCCGCCG AAAAGGCCCG GCAGCTGCGC GAGATCGAGC GCAGGCGGCA GGCCTATCGC GGCACCCGCC CGGCGCCCGA GATCCGGGGC CGCACCGTGA TCGTGGTCGA TGACGGCATC GCCACCGGCG CGACCATGCG CATCGCGCTC AGGGCGCTGG CGCGGTCGGG CGCGGCCCGG GTGATCGTCG CCGTCCCCGT CGCCCCGCCC GATGTGCTGG AGCTGATCCG CGCCGAGGCC GACGAGGTGG TCTGCCTGCG CACGCCCGAG CCCTTTCATG CGGTGGGCTT TCACTATGAC GACTTCGACC AGACCAGCGA CGAAGAGGTG GTTCGCGCGC TGGCCGAGGC CGGTCGCGGC CGGGATTGA
|
Protein sequence | MIARGTAMFA DRTDAGRRLG AALSGRRGGS VLVLALPRGG VPVGLEVARA LDAPLDVLLV RKITAPAHPE LAIGAVVDGS TPQLLLDDQL VAATGATAEH IAAEKARQLR EIERRRQAYR GTRPAPEIRG RTVIVVDDGI ATGATMRIAL RALARSGAAR VIVAVPVAPP DVLELIRAEA DEVVCLRTPE PFHAVGFHYD DFDQTSDEEV VRALAEAGRG RD
|
| |