Gene Pden_4525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4525 
Symbol 
ID4583083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp6621 
End bp7568 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content67% 
IMG OID639771832 
ProductMarR family transcriptional regulator 
Protein accessionYP_918285 
Protein GI119387251 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases
[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACAT CTTCAACCCT GGCGGTCGAA CCCGGCGACA TCGCCGAGGT CCGGCGCTTC 
AACCGTTTCC ACACGCGGCT TGTCGGGGCG CTGAACGAGC ACCTTCTGGC CTCCTCCTAT
TCGCTGCCGC AGATGCGCGT CCTTTACGAG ATCGCCACCG CCGCCCCGGA TGCCGCGCCA
TCGGCGCGTG AGCTGGGCGA TGTTCTGCGG GTCGATACCG GCTATCTCAG CAGGATCATC
GCCGGGCTGG AAAGCGAGGA CCTGCTGGAG CGCCGGTCCA GCCCGACCAA TGCCAAGCGG
CTGGAACTGC GACTGACCGA TCACGGCATG GCGGAATTCG CCAAGCTGAA CGCCGCCTCG
GCCGAGGAGG TCAGGACGCT GCTGGAGCCC TTGTCGGCGA CCGGGCGCCG GCAGTTGGTG
GGCGCGATGG CGCGCATCCG CCGGCTTCTG GGCGACGGCC CGCAGAACCG GACCTTCATC
CTGCGCGACC CCGAGCCCGG CGATCTGGGC TGGATCACCC ATATGAACGG CCGCATCTAT
GCCGAGGAAT ATGGCTGGGA CTGGACCTTC GAGGCGCTGG TCGCCGAGAT CGTCGGCAGG
TTCGCCAGGG AGTTCGATCC CCAAGGCGAG AAATGCTGGG TGGCCGAACT GGAGGGGCAG
GTGGTCGGTT CGGTCATGGT GGTGCGCGAG GACGAGGAGA CCGCGAAACT GCGGCTACTC
TGGGTGGACG AGGCGGCGCG CGGCCTCGGG CTTGGCCGGC GGCTGGTCGA GGAATGCCTG
CGTTTCGCCC GTGCGCGGGG CTATCGGCGC ATGATCCTGT GGACCAACGA CGTCCTGGTC
TCGGCCCGCC GGATCTATCA GGCGGCAGGG TTCGAGTTGA TCGAGGAGGA AAGGCATCGC
AGCTTCGGCA AGGATCTCGT CGGTCAGGTC TGGGCGCGCG TGTTGTGA
 
Protein sequence
MGTSSTLAVE PGDIAEVRRF NRFHTRLVGA LNEHLLASSY SLPQMRVLYE IATAAPDAAP 
SARELGDVLR VDTGYLSRII AGLESEDLLE RRSSPTNAKR LELRLTDHGM AEFAKLNAAS
AEEVRTLLEP LSATGRRQLV GAMARIRRLL GDGPQNRTFI LRDPEPGDLG WITHMNGRIY
AEEYGWDWTF EALVAEIVGR FAREFDPQGE KCWVAELEGQ VVGSVMVVRE DEETAKLRLL
WVDEAARGLG LGRRLVEECL RFARARGYRR MILWTNDVLV SARRIYQAAG FELIEEERHR
SFGKDLVGQV WARVL