Gene Pden_4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4420 
Symbol 
ID4582970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1622162 
End bp1622842 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content70% 
IMG OID639771727 
Productsilent information regulator protein Sir2 
Protein accessionYP_918180 
Protein GI119387125 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.910761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA CCGTGCTGAC GGGGGCCGGC ATTTCGGCCG AAAGCGGGAT CAGGACGTTC 
CGCGCCACTG ACGGGCTGTG GGAATCCCAC CGGATCGAGG ACGTCGCCAC GCCCCAGGGC
TTTCAGCGCG ACCCGGCACT GGTGCATCGC TTCTACAACC AGCGCCGCGC CGATGCCGCC
CGCGCCCAGC CCAACCTTGC GCATCGGGCG CTTGCACGGC TTGCGGAACA TCACCGGGTG
ACGCTGGTCA CGCAGAACGT GGACGACCTG CACGAACGCG GCGGCTCGCC CGAGGTGATC
CACATGCATG GCAGCCTGCT CGGCGCGCTC TGCGCCGGCT GCGGGCATCG CTGGCCGGCG
GCGCTGGTGA TGCGGGCGCT GGACCCCTGC CCCAGTTGCG GCAAGCCGCA GACACGGCCC
GACATCGTCT GGTTCGGCGA GATCCCCTAT CACATGGAGC GGATATGGGA GGCGGTCGAA
CAGGCCGACC TCTTCGCCGC CATCGGCACC TCGGGCCTCG TCTATCCGGC GGCGGGGCTG
GCGCAGCACG CCCGCCGCAA CGGTGCCGAA ACGGTCGAAC TGAACCTGGC CGCCTCGGCC
GTCAGCCGCG ATTTCACCGA TCGCCGCACC GGCCCCGCGA CCGAGGTGGT GCCGCAATGG
GTGGCCGCGC TCTGCAACTG A
 
Protein sequence
MRITVLTGAG ISAESGIRTF RATDGLWESH RIEDVATPQG FQRDPALVHR FYNQRRADAA 
RAQPNLAHRA LARLAEHHRV TLVTQNVDDL HERGGSPEVI HMHGSLLGAL CAGCGHRWPA
ALVMRALDPC PSCGKPQTRP DIVWFGEIPY HMERIWEAVE QADLFAAIGT SGLVYPAAGL
AQHARRNGAE TVELNLAASA VSRDFTDRRT GPATEVVPQW VAALCN