| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3445 |
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| Symbol | |
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| ID | 4582001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 586309 |
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| End bp | 587514 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639770759 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_917212 |
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| Protein GI | 119386157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.655677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA CCATGCCAGT CGCGCTGATC CTGGGCGCCC TGCTGATCGC GGTCGCAGTG
CTGCGCTGGC CCGGCGCCAC GCCGGGCGGT GCCGCCGCCC CGGGCTACCT GACCGCGCCT
GCAGAGCGCG GTTCTCTTGA GGTATCGGTT CTTGCTGAGG GTCGTTTGAA GCCTTCGAAC
CTTGTTGCGG TGGGTGCGCA GGTTTCGGGT CGGATCACCG AGCTGGCGGT GGTTCTGGGC
CAGCGGGTGG AGCAGGGCGA CCTGATCGCG CGGATCGACT CGGTCCAGCA GGCCAACGAA
TTGCGCACCG CACAGGCGGC GCTGGCCAAT CTCAAGGCGC AGATGGCCGA GCGCCGCGCC
GTGCTGGCCC TGGCCGAAAA GACCCTGGAA CGCCAGCAGA ACCTGATCCG CTCGAACGCC
GCCTCGCGCA GCACCATGGA CAGCGCCCAG CAGGATGTCG ACGTCGCCCG CGCCCAGATC
GCCGCGCTGC AGGCCCAGAT CGCCCAGGCC GAGGTCGCCA TCGAGATCGC CCGCACCGAC
CTCGACTATA CCCGCATCAC CGCCCCCATG GCCGGCACCG TGCTGGCCAT CGTCAGCCAG
GCCGGGCAGA CGGTGAACGC GGTGCAGTCC TCGCCCACCA TCGTCGTGCT GGGCCAGCTC
GACCGCATGG ACGTGCATGC CGAGATCTCC GAGGCCGATA TCGGCAAGGT CCGGCCCGGC
CAGAAGGTGC GCTTCAGCCT GCTCGACGAC AGCGGCCGCA GCTACGAGGG CGTGCTGGAC
AGCATCGCGC CGGCGCCGCA GAGCATCGTC AACGACAGCG CCATCCAGGG CGGCACCGGC
ACCGACAGCA GCAGCGGCGC GATCTACTAC ACCGGCATCG TCCCGGTCGA GAACCCCGAC
GGCCGGCTGC GCAGCTACAT GACCGCCCAG GTCAGCATCG TGCTGGGCGC GGCGCAGGAC
GTGCTGACCA TCCCGTCCAG CGCGCTCGGC CGGCGCAATC CCGACGGCAG CCACCAGGTC
CGGGTGCTGG GCGGCGCCGG CATCGAGACC CGCGACGTGG TGATCGGGCT CAACGACAAG
GTGGCGGCCG AGGTGGTCTC GGGCCTGGCC GAGGGCGAGC GCGTGGTGAC CGGCGAGCAG
GGCGCCGCCC CGGCCGCCGC CGCCCCCCGC GGCAGCCGCC GCATGATGGG GCCGCTGGGT
GGCTGA
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| Protein sequence | MRKTMPVALI LGALLIAVAV LRWPGATPGG AAAPGYLTAP AERGSLEVSV LAEGRLKPSN
LVAVGAQVSG RITELAVVLG QRVEQGDLIA RIDSVQQANE LRTAQAALAN LKAQMAERRA
VLALAEKTLE RQQNLIRSNA ASRSTMDSAQ QDVDVARAQI AALQAQIAQA EVAIEIARTD
LDYTRITAPM AGTVLAIVSQ AGQTVNAVQS SPTIVVLGQL DRMDVHAEIS EADIGKVRPG
QKVRFSLLDD SGRSYEGVLD SIAPAPQSIV NDSAIQGGTG TDSSSGAIYY TGIVPVENPD
GRLRSYMTAQ VSIVLGAAQD VLTIPSSALG RRNPDGSHQV RVLGGAGIET RDVVIGLNDK
VAAEVVSGLA EGERVVTGEQ GAAPAAAAPR GSRRMMGPLG G
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