Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3297 |
Symbol | |
ID | 4581858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 462189 |
End bp | 464129 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770618 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_917071 |
Protein GI | 119386016 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00745206 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.534464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCT TTCCACCCGT TGACCTGTCA CTGACCCTTT CGCTCGTCAC CGTGCTCGGC ATGGCGATGG CGGCAGCCGG CAGATGGCTG CCCAGCGGAG CTTTCGACGC TCTGGAGCTA CCGGGGCTGG TGCTAGTCTA TCTGGCTGGC GGCCTGCCCA CCGGCTGGCG CGCGCTGTCG GAACTGTGGC GCGCGCGCGT GCTTGACATC GACCTGTTGA TGATCGTCGC GGCAATCGCC GCCGCAATCG TCGGCGCCCC GTTCGAGGGT GCGGTGCTGC TGACGCTGTT CAGCATCTCG ACCACGCTGG AGGAACGCGC GCTTGGCCGC GCCCGCCGCG CCATCGAGGC GCTGATGGCG CTGCGCCCCG AGACCGCCTT GCGCAAGACC GCCAACGGCG CTGTCGAGGA AGTTCCCGCC GAGGTGCTGG CCGTCGGCGA TGTGGTGGTG CTGCGCCCCG GCGCCCGGGT GCCCAGTGAT GGCGTGGTCG TCACCGGGCG CGGCGGCATC GACGAGGCCA ACATCACCGG CGAATCCATG CCCGTGTCAA AAGAGGCCGG TGCGCAGGTG TTCGAGGCCA CGATCAATCT GGACGGCGTG CTGGAGGTCG AGGTCACGCG CAGCGTCAGC GACAGCACCA TCGCCCGCAT GATCCGCCTG GTGACCGAGG CGCAGGCCGC CCGCGCACCC TCAGAGCGGT TCAGCGAATG GTTCGGCCAG CGCTACACGG TCGCGGTGCT GGCGGGTGCG GTGATCGCCT TTGCCACGTT CTGGTGGCTG GGCGGCGACT GGGAACTGGC GCTTTACCGC GCCGCCACGC TGCTGGTCGC CGCCAGCCCC TGCGCCATCG TCATTTCCGT CCCCGCCGCG ATCCTGTCGG CCCTGTCGGC GGCGGCGCGC GGCGGTGTTC TGTTCAAGGG CGGCGGCGCG CTGGAGACGC TGGCCGAGGT CGATATCTTC GCCTTCGACA AGACCGGCAC CCTGACCACC GGCCGCGCCG AGGTGACGGA AATCGTCGCG CTGGATGGCG ACGAGGCCGG GTTCCTGTCG CTGCTGGCGG GGCTGGAGGC GCATTCCGAG CATCATATCG CCGCCGCGAT CCGCCGGGAA GTTGCCACGC GCGGGCTTGA TCCAGCAATC GTTGCCGATG TGAACGCCCG GCCAGGCATC GGTATCGAAG GGGCCGATGC ACTTGGCCCG GTTTGGGCGG GCAATGCCTA TCTTGCCGAG GACATGAAGG CTGCAACGGA TCACCCCGCG TTGCAGGCGC TGGCGGATGG CGCCAATACG GTCGTCTATC TGGGTCGCGG CGCCACCCTG CTGGGCGCCG TCAGCGTAGC GGACGAGGCA CGGGCCAGTT CCGCAGGGGC GATCACGGCC CTGCGCGACA GTGGTGTCCG CCGCATCGTC ATGATGACCG GGGATCGCAG GCCGGTGGCG CTGCGCATCG GCGCCCGGCT TGGGCTGAGG CCCGAAGAGA CTCACGCCGA AATGCTGCCA CAGGACAAGG TTCGCGCGGT TGGCGAACTG GCCGCAACCG GCCGCGTTGC CTTTGTCGGC GACGGCGTGA ACGACGCCGC GGCGCTGGCC CGCGCCGATG TCGGCATCGC CATGGGCGCG GCCGGGTCCG AGGTGGCGCT TCAGGCCGCC GATGTGGCGC TGCTGTCCGA GGATATGGAG CGGCTTGCGG ACGCGCACCG CCTGTCGCGC CGAACGTCAA GGGTGATCCG GCAGAACCTG ACCTTCGCCA TCGGCGCCAT GGTGGTTCTG GTCATCGGCG GGCTGTTCTT CGATCTGCCG TTGCCGCTGG TGGTGATCGG CCATGAAGGC GGCACCGTGC TGGTGGTGCT GAACGGGCTG CGGTTGTTGT CGGACCCGAT CCGCCGGCCG AAGGCGTCTG TTGCCGGACA GGCGCCGACG GGTGTCGCGC GGCCGGCCTG A
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Protein sequence | MKRFPPVDLS LTLSLVTVLG MAMAAAGRWL PSGAFDALEL PGLVLVYLAG GLPTGWRALS ELWRARVLDI DLLMIVAAIA AAIVGAPFEG AVLLTLFSIS TTLEERALGR ARRAIEALMA LRPETALRKT ANGAVEEVPA EVLAVGDVVV LRPGARVPSD GVVVTGRGGI DEANITGESM PVSKEAGAQV FEATINLDGV LEVEVTRSVS DSTIARMIRL VTEAQAARAP SERFSEWFGQ RYTVAVLAGA VIAFATFWWL GGDWELALYR AATLLVAASP CAIVISVPAA ILSALSAAAR GGVLFKGGGA LETLAEVDIF AFDKTGTLTT GRAEVTEIVA LDGDEAGFLS LLAGLEAHSE HHIAAAIRRE VATRGLDPAI VADVNARPGI GIEGADALGP VWAGNAYLAE DMKAATDHPA LQALADGANT VVYLGRGATL LGAVSVADEA RASSAGAITA LRDSGVRRIV MMTGDRRPVA LRIGARLGLR PEETHAEMLP QDKVRAVGEL AATGRVAFVG DGVNDAAALA RADVGIAMGA AGSEVALQAA DVALLSEDME RLADAHRLSR RTSRVIRQNL TFAIGAMVVL VIGGLFFDLP LPLVVIGHEG GTVLVVLNGL RLLSDPIRRP KASVAGQAPT GVARPA
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