Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3286 |
Symbol | |
ID | 4581847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 452288 |
End bp | 452920 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639770607 |
Product | cytochrome B561 |
Protein accession | YP_917060 |
Protein GI | 119386005 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0957495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAGG CGAAAAGGGA CGGCGGTATT TCGGACGTTG CCGATACCAT GCGCGTGGTG CGGGTCTGGG ATCCGGTGGT GCGCAGCTTT CATTGGGGCC TGGTTGCCGC CTTTGCAGTG GCATGGCTCG CGGCGGACGA GGTGCAACCG CTTCACGAGC CGGCCGGCTA TGCGGTGGCG GCATTGCTTG TGCTCCGCCT GATCTGGGGT TTTGTCGGCA GTCACCATGC CCGCTTCGCG CAATTCATGC GTGGCCCTGC CGCGACGCTG GTCTATCTCG GAGACATGCT GCGCGGGCGG GAGCGGCGCC ATCTCGAGCA CAACCCGGCC GGCGCCGCGA TGATCGTGGC ACTTATGGTT ACGCTTTCCG GCACCGCGCT GAGCGGCTGG TTGCTCGAAC AGTCGATCGA GGAAGCCCGT GCCGTGACGT TTGTGGGCGA GCATGGCAGC CGGGAAGTCA GGGGGGACAA GACCTTGAAG GAGGTGCATG AAACGCTGGC CAACTTGGCG TTGGTCCTCG TGGCCCTGCA TGTCGGAGGT GTGGCGCTCA CCTCATGGCG CCATCGGGAG AACCTGCCCC GTGCCATGGT CACGGGCCGA AAGCGCCCCC CTGGCGCAAA TGACGTGACC TGA
|
Protein sequence | MIEAKRDGGI SDVADTMRVV RVWDPVVRSF HWGLVAAFAV AWLAADEVQP LHEPAGYAVA ALLVLRLIWG FVGSHHARFA QFMRGPAATL VYLGDMLRGR ERRHLEHNPA GAAMIVALMV TLSGTALSGW LLEQSIEEAR AVTFVGEHGS REVRGDKTLK EVHETLANLA LVLVALHVGG VALTSWRHRE NLPRAMVTGR KRPPGANDVT
|
| |