Gene Pden_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3286 
Symbol 
ID4581847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp452288 
End bp452920 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID639770607 
Productcytochrome B561 
Protein accessionYP_917060 
Protein GI119386005 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0957495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGG CGAAAAGGGA CGGCGGTATT TCGGACGTTG CCGATACCAT GCGCGTGGTG 
CGGGTCTGGG ATCCGGTGGT GCGCAGCTTT CATTGGGGCC TGGTTGCCGC CTTTGCAGTG
GCATGGCTCG CGGCGGACGA GGTGCAACCG CTTCACGAGC CGGCCGGCTA TGCGGTGGCG
GCATTGCTTG TGCTCCGCCT GATCTGGGGT TTTGTCGGCA GTCACCATGC CCGCTTCGCG
CAATTCATGC GTGGCCCTGC CGCGACGCTG GTCTATCTCG GAGACATGCT GCGCGGGCGG
GAGCGGCGCC ATCTCGAGCA CAACCCGGCC GGCGCCGCGA TGATCGTGGC ACTTATGGTT
ACGCTTTCCG GCACCGCGCT GAGCGGCTGG TTGCTCGAAC AGTCGATCGA GGAAGCCCGT
GCCGTGACGT TTGTGGGCGA GCATGGCAGC CGGGAAGTCA GGGGGGACAA GACCTTGAAG
GAGGTGCATG AAACGCTGGC CAACTTGGCG TTGGTCCTCG TGGCCCTGCA TGTCGGAGGT
GTGGCGCTCA CCTCATGGCG CCATCGGGAG AACCTGCCCC GTGCCATGGT CACGGGCCGA
AAGCGCCCCC CTGGCGCAAA TGACGTGACC TGA
 
Protein sequence
MIEAKRDGGI SDVADTMRVV RVWDPVVRSF HWGLVAAFAV AWLAADEVQP LHEPAGYAVA 
ALLVLRLIWG FVGSHHARFA QFMRGPAATL VYLGDMLRGR ERRHLEHNPA GAAMIVALMV
TLSGTALSGW LLEQSIEEAR AVTFVGEHGS REVRGDKTLK EVHETLANLA LVLVALHVGG
VALTSWRHRE NLPRAMVTGR KRPPGANDVT