Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3030 |
Symbol | |
ID | 4581596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 206944 |
End bp | 207768 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639770356 |
Product | methyltransferase type 12 |
Protein accession | YP_916809 |
Protein GI | 119385754 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAATC TGATCGATTG GGACCTTCTG GACCGTCTGC TGACGCCCCC GGTCTTCGCC CAGTCGCCGA TGTGGGATGC TTTCGCGGAT CGCTACAACG GCTATGTCGC GATGCAGTCC GAATATACCG GATTGCAGAT CGACATGATG AATATCGGGG TAGACGAAAC CGTGCTGGAT GTAGGCGCCG GGCCGGGCAG GATCGCCATT CCGGCCGCCG CCCGCGCCCG GTCGGTGACC GCGCTCGATG TCTCCCGGCC GATGCTGGAT CATCTGGAAC GCAACGCAAG GCAGGCGGGG CGCGACAATA TCCGCAGGCT CGACCTTGCA TGGCAAGACG TCGAGCCGGA CGGTAATGTC GAGGTGCATG ACATCGTGGT CGCCGCGCGT TCGCCCGCGA TGAACGACCT GCGCAAGATC GATGCGCTGG CGCGCAAACG TGCCTATGTG ACGCTGTTTT CGGGGCCCAG TCTCAAATGC TTTCACGACA GCTTGGTGGC GGGAATCGAG CCCGCCCCGC CGTCAGCGGC GGCCAAGCCT ACGCCGATGC CGGGATATGC GCTGGTCTTC AACCGCCTTG TGGCGATGGG GCTTGAGGTG AACGTCGGTT TTGTTCCCGA CGGCTTTTCC CAAGTCTTCC CGGACTGGGA TGCGGTTCTG GACGGGTTTT CCTGGCTGGG CATCGGCAAA ACCGACGAGC CGCGATTCCG CGACAACATC GCCCCCTATC TGAGCCAGAC CCAAGACGGG CTGGCGCTGC GCATGGAAAC GCGAACCTGC ATCCTGTGGT GGGACAAGGT CCATCCGGCG GGTTTCGGGA CGTGA
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Protein sequence | MGNLIDWDLL DRLLTPPVFA QSPMWDAFAD RYNGYVAMQS EYTGLQIDMM NIGVDETVLD VGAGPGRIAI PAAARARSVT ALDVSRPMLD HLERNARQAG RDNIRRLDLA WQDVEPDGNV EVHDIVVAAR SPAMNDLRKI DALARKRAYV TLFSGPSLKC FHDSLVAGIE PAPPSAAAKP TPMPGYALVF NRLVAMGLEV NVGFVPDGFS QVFPDWDAVL DGFSWLGIGK TDEPRFRDNI APYLSQTQDG LALRMETRTC ILWWDKVHPA GFGT
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