Gene Pden_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3030 
Symbol 
ID4581596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp206944 
End bp207768 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID639770356 
Productmethyltransferase type 12 
Protein accessionYP_916809 
Protein GI119385754 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAATC TGATCGATTG GGACCTTCTG GACCGTCTGC TGACGCCCCC GGTCTTCGCC 
CAGTCGCCGA TGTGGGATGC TTTCGCGGAT CGCTACAACG GCTATGTCGC GATGCAGTCC
GAATATACCG GATTGCAGAT CGACATGATG AATATCGGGG TAGACGAAAC CGTGCTGGAT
GTAGGCGCCG GGCCGGGCAG GATCGCCATT CCGGCCGCCG CCCGCGCCCG GTCGGTGACC
GCGCTCGATG TCTCCCGGCC GATGCTGGAT CATCTGGAAC GCAACGCAAG GCAGGCGGGG
CGCGACAATA TCCGCAGGCT CGACCTTGCA TGGCAAGACG TCGAGCCGGA CGGTAATGTC
GAGGTGCATG ACATCGTGGT CGCCGCGCGT TCGCCCGCGA TGAACGACCT GCGCAAGATC
GATGCGCTGG CGCGCAAACG TGCCTATGTG ACGCTGTTTT CGGGGCCCAG TCTCAAATGC
TTTCACGACA GCTTGGTGGC GGGAATCGAG CCCGCCCCGC CGTCAGCGGC GGCCAAGCCT
ACGCCGATGC CGGGATATGC GCTGGTCTTC AACCGCCTTG TGGCGATGGG GCTTGAGGTG
AACGTCGGTT TTGTTCCCGA CGGCTTTTCC CAAGTCTTCC CGGACTGGGA TGCGGTTCTG
GACGGGTTTT CCTGGCTGGG CATCGGCAAA ACCGACGAGC CGCGATTCCG CGACAACATC
GCCCCCTATC TGAGCCAGAC CCAAGACGGG CTGGCGCTGC GCATGGAAAC GCGAACCTGC
ATCCTGTGGT GGGACAAGGT CCATCCGGCG GGTTTCGGGA CGTGA
 
Protein sequence
MGNLIDWDLL DRLLTPPVFA QSPMWDAFAD RYNGYVAMQS EYTGLQIDMM NIGVDETVLD 
VGAGPGRIAI PAAARARSVT ALDVSRPMLD HLERNARQAG RDNIRRLDLA WQDVEPDGNV
EVHDIVVAAR SPAMNDLRKI DALARKRAYV TLFSGPSLKC FHDSLVAGIE PAPPSAAAKP
TPMPGYALVF NRLVAMGLEV NVGFVPDGFS QVFPDWDAVL DGFSWLGIGK TDEPRFRDNI
APYLSQTQDG LALRMETRTC ILWWDKVHPA GFGT