Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3028 |
Symbol | |
ID | 4581594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 202683 |
End bp | 204353 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639770354 |
Product | cytochrome-c oxidase |
Protein accession | YP_916807 |
Protein GI | 119385752 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCC AGATCAGCGA CAGCATCGAA GAGAAGCGGG GCTTCTTCAC CCGCTGGTTC ATGTCGACGA ACCACAAGGA TATCGGTGTC CTCTACCTGT TCACGGCGGG TCTGGCCGGG CTGATCTCGG TCACACTCAC CGTCTACATG CGCATGGAAT TGCAGCATCC GGGTGTGCAA TACATGTGTC TGGAAGGCAT GCGGCTGGTC GCCGACGCTG CGGCGGAATG CACGCCGAAC GGCCATCTGT GGAATGTCGT CGTGACCTAT CACGGCATCC TGATGATGTT CTTTGTCGTG ATCCCGGCGC TGTTCGGCGG TTTCGGCAAC TATTTCATGC CGCTGCATAT TGGTGCCCCG GACATGGCTT TCCCGCGGCT GAACAACCTG TCATATTGGC TCTATGTCTG CGGGGTCTCG CTTGCCATCG CCTCGCTGCT GTCGCCGGGC GGCTCGGATC AGCCGGGGGC AGGGGTGGGC TGGGTTCTGT ATCCGCCGCT CTCCACGACC GAGGCCGGCT ATGCGATGGA CCTGGCGATC TTTGCCGTCC ACGTCTCGGG CGCAAGCTCG ATCCTGGGCG CAATCAACAT CATCACCACC TTCCTGAACA TGCGCGCCCC GGGCATGACG CTGTTCAAGG TGCCGCTGTT TGCCTGGGCG GTCTTCATCA CCGCCTGGAT GATCCTGCTG TCGCTGCCGG TGCTGGCCGG GGGTATCACC ATGCTGCTGA TGGACCGCAA CTTCGGCACG CAGTTCTTCG ATCCGGCCGG CGGCGGCGAT CCGGTGCTGT ATCAGCACAT CCTGTGGTTC TTCGGCCATC CCGAGGTCTA CATGCTGATC CTGCCCGGTT TCGGCATCAT CAGTCACGTC ATCTCGACCT TCGCCAGGAA GCCGATCTTC GGTTATCTGC CGATGGTTCT GGCCATGGCC GCCATCGCCT TTCTCGGCTT CATCGTCTGG GCGCATCACA TGTACACGGC CGGCATGTCG CTGACCCAGC AGACCTATTT CCAGATGGCG ACCATGACCA TCGCGGTGCC CACCGGCATC AAGGTCTTCT CGTGGATCGC GACCATGTGG GGCGGCTCGA TCGAGTTCAA GACGCCGATG CTCTGGGCCT TCGGCTTCCT GTTCCTGTTC ACCGTCGGCG GCGTGACCGG GGTCGTCATC GCCCAGGCGC CCTTGGACCG CGTTTATCAC GACACCTACT ATATCGTGGC GCATTTCCAC TATGTGATGA GCCTTGGCGC CGTCTTCGCG ATCTTTGCAG GCACCTATTA CTGGATCGGC AAGATGTCGG GCCGGCAATA CCCGGAATGG GCGGGCCAGC TGCATTTCTG GATGATGTTC ATCGGCTCGA ACCTGATCTT CTTCCCGCAG CACTTCCTGG GCCGCCAGGG CATGCCGCGC CGCTATATCG ACTACCCGGT CGAGTTCTCG TACTGGAACA ACATCTCGTC GATCGGCGCC TATATCTCCT TCGCCTCCTT CCTGTTCTTC ATCGGCATCG TGTTCTACAC GCTCTTCGCC GGCAAGCCCG TGAACGTGCC GAACTACTGG AACGAGCATG CGGACACGCT GGAATGGACC CTGCCCTCGC CGCCGCCCGA GCATACCTTC GAGACCCTGC CCAAGCCTGA GGACTGGGAT CGCGCACAGG CGCATCGGTA G
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Protein sequence | MSAQISDSIE EKRGFFTRWF MSTNHKDIGV LYLFTAGLAG LISVTLTVYM RMELQHPGVQ YMCLEGMRLV ADAAAECTPN GHLWNVVVTY HGILMMFFVV IPALFGGFGN YFMPLHIGAP DMAFPRLNNL SYWLYVCGVS LAIASLLSPG GSDQPGAGVG WVLYPPLSTT EAGYAMDLAI FAVHVSGASS ILGAINIITT FLNMRAPGMT LFKVPLFAWA VFITAWMILL SLPVLAGGIT MLLMDRNFGT QFFDPAGGGD PVLYQHILWF FGHPEVYMLI LPGFGIISHV ISTFARKPIF GYLPMVLAMA AIAFLGFIVW AHHMYTAGMS LTQQTYFQMA TMTIAVPTGI KVFSWIATMW GGSIEFKTPM LWAFGFLFLF TVGGVTGVVI AQAPLDRVYH DTYYIVAHFH YVMSLGAVFA IFAGTYYWIG KMSGRQYPEW AGQLHFWMMF IGSNLIFFPQ HFLGRQGMPR RYIDYPVEFS YWNNISSIGA YISFASFLFF IGIVFYTLFA GKPVNVPNYW NEHADTLEWT LPSPPPEHTF ETLPKPEDWD RAQAHR
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