Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2941 |
Symbol | |
ID | 4581508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 105290 |
End bp | 106483 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639770268 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_916721 |
Protein GI | 119385666 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.224778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA GACTTTCTCC CGGCGTCTGC GCCGGGCTTG TGCTTTGCTG CCTGATGGCG GCCGCCCCGG CGGCGGCGCA GCAATTGCCG CCGCCGCAGG TCAGCGTGCA GGAAATGACG CCCGAGGCGC TGCCGGTGGT GAACGAATTG CCCGGCCGCG TGGCCGCGAC CCGCACCGCC GAGGTGCGGC CGCGCGTCGG CGGCATCGTG ATCGAGCGCG TCTTCGAGCA GGGCGGCAAG GTCGAGGCGG GCGATGTGCT TTACCGCATC GACCCCGCCC CCTATGACGT GCGCGTCGCC AGCGCCGAGG GCGCGCTGGC CCGGGCCGAG GCCACGGCGC TGAACGCCGC CGACCAGGAA AAGCGTGCCC GCGCCCTGCG CGAGCGCAAG GTGACGGCGG GGGTCGACCT GGACAATGCC GCCACCGCGC TGGCCCAGGC CCAGGCGGAT GTGGCCATCG CCCGCGCCTC GCTGCAGGAG GCGCAGCTGA ACCGTTCCTA TACCGAGGTC GCGGCGCCCA TCGCCGGCGT GGTCGGCCGG GCGCTGGTGA CCGAGGGCGC GCTGGTCAAC GCCCAGACCG ACATCATGGC GACGATCCAG CAGCTCGACC CGGTCTATGT GGACTTCACC CAGTCCTCGT CCGAACTGTT CGCGTTGCGC CGGGCCCTGG CGGCGGGGCA ACTGGCCATG ATCTCGGCCG ACGCGGCGGC GGTGCGGCTG ATCTTCGACG ACGGCAGCGA ATATGCCCAT CCCGGCAAGC TGCTGTTTTC CGAGGCGAGC GTGGACAGCT CGACCGGGCA GATCACGCTG CGCGCCGAGT TCCCGAACCC CGAGGGCGAC CTGCTGCCCG GGCTTTACGT CCGGGTGCGG ATCGAGCAGG CGGTGCGCGA CAACGCCCTG ACCGTGCCGC AGATGGCGGT GCAGCGCGAC CAGTCGGGCC AGGCCTATGT CTATGCGCTG AAGGATGCCG ACACGGTCGA GCGCCGCGAC GTGACGCTGG GCCAGACCGC CGGCAACCGC TGGCTGGTGG AAAGCGGGCT GAAGCCGGGC GACCGGGTCG TGGTCGCCGG AGCGCAGAAG CTTTACCCCG ACGCCAAGGT GGTGCCGCAG CCTGTGGACG CGGCCCAGCC GGCGGTGCCG GCCGGTGCCG CCGCGGCGGC CGAAGCGCCC GCCCCGGCGC CTGCGCAGGA GTAG
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Protein sequence | MTMRLSPGVC AGLVLCCLMA AAPAAAQQLP PPQVSVQEMT PEALPVVNEL PGRVAATRTA EVRPRVGGIV IERVFEQGGK VEAGDVLYRI DPAPYDVRVA SAEGALARAE ATALNAADQE KRARALRERK VTAGVDLDNA ATALAQAQAD VAIARASLQE AQLNRSYTEV AAPIAGVVGR ALVTEGALVN AQTDIMATIQ QLDPVYVDFT QSSSELFALR RALAAGQLAM ISADAAAVRL IFDDGSEYAH PGKLLFSEAS VDSSTGQITL RAEFPNPEGD LLPGLYVRVR IEQAVRDNAL TVPQMAVQRD QSGQAYVYAL KDADTVERRD VTLGQTAGNR WLVESGLKPG DRVVVAGAQK LYPDAKVVPQ PVDAAQPAVP AGAAAAAEAP APAPAQE
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