Gene Pden_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2017 
Symbol 
ID4580401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2023637 
End bp2024311 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID639769346 
ProductABC transporter related 
Protein accessionYP_915805 
Protein GI119384749 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2884] Predicted ATPase involved in cell division 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.661997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGA TGCAGAACCT GTCCTTCGGC TACAGCGGCA ACGATCCGTT GCTTGCCGAC 
ATGTCGCTGA CGCTACAGCC GGGTTCCTTT CATTTCCTGA CCGGCCCGTC GGGCGCGGGC
AAGACCACCT TCCTGCGGCT GTGCTATGCC GAACTGATGC CGAGCGCCGG GCAGATGACG
GCATTCGGCC AGGACGTGCG CACGCTGTCG CGCGACGGCA TCGCCGCGTT GCGCCGCCGG
GTGGGGGTGG TGCATCAGGA TACGCAGTTT CTTGACCACC TGCCGGTGGC GGAAAACATC
GCGCTGCCGT TGCTGGTTTC GGGCGAGCAG ATCGACATGC CGGCCCTGGG CGAGCTTCTG
GCCTGGGTGC AGCTGTCCGG CCACGCCCGC GCCATGCCGC CCGAGCTTTC CGGGGGCGAG
CGGCAGCGTG CCGCCCTGGC CCGTGCCGTC ATCATGTCGC CCGACCTGAT CCTGGCCGAT
GAGCCGACGG GCAACCTGGA TTGGGACATG TCGATGCGGC TTTTGCAGCT GCTGATCGAA
CTGAACCGTT CTGGCAAGGC GGTGCTGATC GCCACCCACG ACCTGAACCT GATCCGTGCC
GCCAAGCAGC AGGTGCAGGC GCGGGTGCTG CGCATCGCGG GCAAGAGGCT GCAACTGGCG
GGAGCGGACC TGTGA
 
Protein sequence
MIEMQNLSFG YSGNDPLLAD MSLTLQPGSF HFLTGPSGAG KTTFLRLCYA ELMPSAGQMT 
AFGQDVRTLS RDGIAALRRR VGVVHQDTQF LDHLPVAENI ALPLLVSGEQ IDMPALGELL
AWVQLSGHAR AMPPELSGGE RQRAALARAV IMSPDLILAD EPTGNLDWDM SMRLLQLLIE
LNRSGKAVLI ATHDLNLIRA AKQQVQARVL RIAGKRLQLA GADL