| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1943 |
|---|
| Symbol | |
|---|
| ID | 4581065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1944200 |
|---|
| End bp | 1945057 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639769264 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915732 |
|---|
| Protein GI | 119384676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0650141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00812028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGATGGGTG CGCGGGGTGC GTCCTATCCT CCCGCAGGCG GGTCTGGTCA GGATATTCGG
CGATCTGCCA AGGGGGAAGG CATGCGGATT TCCAATGCGG CCTCGATGAA AAGCGTCGGC
GAAGTGCCGA TCGACAAGAT GGGGCTCCAA CATTATTTCG TCAATTACGA TAAATATATC
GGCCCGCTTC GAATGCGGCC GTTGCGATTG CTGGAATTGG GCATAGCGCG AGGCGATTCG
CTGAAATACT GGGAATCCTG GCTGCCGAAT GCCGAAATCA CCGGGCTGGA CATCAATCCC
TGCAAGGCCC GTTTCGAAAG CGGCCGGGTG CGCTGCTATG TCGGCGAACA GCAGGACAAG
GCGCTTCTGG ACCGGATGGC GGCGGAACGG GCGCCGCAAG GGTTCGACGT CATCATCGAC
GATGCCTCGC ATGTCGGGCA ATTGTCGCGC ATCAGTTTCT GGCATCTCTT TGAAAACCAC
CTCAAGCCGG GCGGATATTA TTTCATCGAG GATTGGGGCA CCGGCTATTG GCGGCAATAT
CCCGACGGCA AATCCTATCG CCCCCGGCCG CCCGGGCTTT CCCCGCGCGA AAGGCTGCTC
GACAGGCTGC ATCGATCAGG GCTGGCGCAG GCGATCCATC CGCTGGGCAA GCTGACCGGC
TGGATGCGCT GGAACCTGGT GCGGCGGCGG TTTCACGGCC ATGACCGCGG CATGGTCGGC
TTCGTCAAGG AACTGATCGA CGAATGCGGG GCCGAGGACA TGACCCATCC CGATTTCGGC
ACCGGCACGC CGCGCAGCTC GCGCTTTGAC TGGATGCGGG TCTCGCTGGG CCATGTGGTG
ATCCGCAAGG CCGGCTGA
|
|---|
| Protein sequence | MMGARGASYP PAGGSGQDIR RSAKGEGMRI SNAASMKSVG EVPIDKMGLQ HYFVNYDKYI
GPLRMRPLRL LELGIARGDS LKYWESWLPN AEITGLDINP CKARFESGRV RCYVGEQQDK
ALLDRMAAER APQGFDVIID DASHVGQLSR ISFWHLFENH LKPGGYYFIE DWGTGYWRQY
PDGKSYRPRP PGLSPRERLL DRLHRSGLAQ AIHPLGKLTG WMRWNLVRRR FHGHDRGMVG
FVKELIDECG AEDMTHPDFG TGTPRSSRFD WMRVSLGHVV IRKAG
|
|---|
| |