Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1631 |
Symbol | |
ID | 4581011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1612232 |
End bp | 1614451 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768946 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_915425 |
Protein GI | 119384369 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.371565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCT TCGTATCCAG ATGCCGGGTT TCGGCGTTTC GGCTGGTCGC ACTGTTGTGG CTGGGCTGCG CCGCGATCCA GATGCCCGTT GCGGCGGCGG AATACGAATT CGACATTCCG GCGCAGCCGC TGGCGCGGAC GATCAACCGC ATCGGGCAGG TCGCCGGTCT TTCCGTGCTG ATCAAGGGGA ACGCCCCAGA CCTCGCCGGT CCACCGCTTT CGGGGCGCAT GACGCTGGAC GCAGCCTTGC GCACGGTGCT GCAGGAAGGG CGGGGCCGCT ATCGCTTTAC CCCCCAGGGC AGCCTTGTCG TCGAACTGCC GGAGCCGCCC GATCCGGCCA CGCCCTCGCC CGACCCGACG GTCACGCTTC AGACGGTGGT GATCACCGCG GCCGGTCATG CCCAGCAACT GGCCGATGCC CCGGCGACGA TGACCGTCAT CGAGGCGCAG GAACTGGCAG GCCGCCCGAC CCCGACGCTG GCCGAGGCGC TGCGCGGGGT GCCCGGCCTG CATGTGGGCG CCCCCGGCCG CGACGGCGGC ACGCCGATCA CCCTGCGCGG CATGGGACAA TCCCATGTGC TGTTCATGAT CGACGGCAAG CCGCTCAGCG CCTCCGAGGA GGCGGCCTAT AACGGCCGCG GCCTGGGCGC CAAGGCAGGC TTCCTGCCGC CGATCCCGGC CATCGAGCGG ATCGAGGTGA TCCGCGGCCC GATGTCCGCG CTTTACGGAT CGGCCGCCTC GGGCGGCGTG ATCAATGTCA TCACGCGGCC GGTTCCCGAT GCCTGGACGG GCAGCCTGGA TCTTGGCCTG ACGCATGATC CCGGCCCCGG TTCCGGGGCT GAGCGCGAGG CCCGCTTCAT GCTGGGCGGG CCGCTGCTGC GCGACCGGCT GGGGCTGATG CTTTACGGTT CGCACAATCG CCGCGAGGGG GCGGGCCTGC CCCCGCCCTA CGAGGACGGC ATCAGCGAGC GGGTCAACCT TGGCGGCAGG CTCGGCTGGA ATCCGGCCAC GAACCAGTCC GTGGAGCTGG ATCTATGGGG CAGCCGCTTG CGCCTGCGCG GCAATGCGCC CGACCCCGCC GCCTTCGATA CCCGGATACG CGACCGGGGC AGCAGCCTGA CCCATCGCCT GCACTGGGGT GAACGGGCCG AGACCGTATC CTTCCTGTTC CGCGAAACCA CGGATTTCGA TGCCGGCAAC CAGAGCGGCC ATGAGGCGCT GACCTTCAGC ACCCGCTCGT CCCTGCCCTG GGGACGGCAT CACCTGACCT TCGGGCTTGA GCAACGGCGC GAACGCACGC GGCACGACCC CGACCGCCTG CCCGATTCCG CCGTCACCGA TCTCGACCGC TGGCACCGCG CGCTTTATGG CGAGGGCAGG TTCGCGCTGT CCTCCGACCT GACCCTGACC CTTGGCCTGC GCCATGACCG CAACGAGAAA TACGGCGCGC AGCTGACGCC CAGGGCCTAT GCGGTATGGC GCCCCCTGCC CGGCCTGACC GTCAAGGGCG GGCTTGGCAG CGGCTATCGG GTGCCGGCGT TGAAACAGGC CGACGACGAT GTCTGGGAGC CCTCGGGCGG CGACGGCCGA TCCCGCGACC GGGGCAACAG CGCCCTGAGG CCCGAGCGGA GCAGGAATTA CGAACTCGGC CTGATCTGGG AGGCGCCGGG CGGCATCCAG ATCGGGGCGA CCGCGTTTTA CACGCGCTTC CGGGACCGTA TCGGCCGTGC CGACCTGTGC CGCACGCCGG CGGGTCAGGC CCCCTCCTGC GTGCTGAACG GCGCGCATCA TGTGGCGGTC ACGCAATACC GCAACGAAGG CGAGGCCCGG CTGCGCGGTG CGGAACTTAC GCTCGACATC CCGTTGGATG ACATGACGCT TTCGGCGAAT TACACATGGT CGGATTCAAG GATCACCAGC GGCCCGAACG CCGGGCGGCC GTTTCACAAC CTGCCCCGGC ACATGCTGAA CCTGAGCCTG GACTGGCAAC CGGCCGAGGC GCTGAACCTT TGGGCGCGCG CGCGTTACCG CAGCCGATCC GAGGCGCTTG GACGGAGCGC CGGCCTGCAA AGCCATCTGA TCGTCGATCT TGGCCTGGAC TATCGCCTGC GCGACGGCGT GACCGGCACG CTCGGCATCT ACAATGCCGC GGATGTGGTG CCGGACGAAA ACGCCGTGGA TGGGCGGCGG CTCCATATCG GGCTCGGCAC GTCGTTCTGA
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Protein sequence | MSSFVSRCRV SAFRLVALLW LGCAAIQMPV AAAEYEFDIP AQPLARTINR IGQVAGLSVL IKGNAPDLAG PPLSGRMTLD AALRTVLQEG RGRYRFTPQG SLVVELPEPP DPATPSPDPT VTLQTVVITA AGHAQQLADA PATMTVIEAQ ELAGRPTPTL AEALRGVPGL HVGAPGRDGG TPITLRGMGQ SHVLFMIDGK PLSASEEAAY NGRGLGAKAG FLPPIPAIER IEVIRGPMSA LYGSAASGGV INVITRPVPD AWTGSLDLGL THDPGPGSGA EREARFMLGG PLLRDRLGLM LYGSHNRREG AGLPPPYEDG ISERVNLGGR LGWNPATNQS VELDLWGSRL RLRGNAPDPA AFDTRIRDRG SSLTHRLHWG ERAETVSFLF RETTDFDAGN QSGHEALTFS TRSSLPWGRH HLTFGLEQRR ERTRHDPDRL PDSAVTDLDR WHRALYGEGR FALSSDLTLT LGLRHDRNEK YGAQLTPRAY AVWRPLPGLT VKGGLGSGYR VPALKQADDD VWEPSGGDGR SRDRGNSALR PERSRNYELG LIWEAPGGIQ IGATAFYTRF RDRIGRADLC RTPAGQAPSC VLNGAHHVAV TQYRNEGEAR LRGAELTLDI PLDDMTLSAN YTWSDSRITS GPNAGRPFHN LPRHMLNLSL DWQPAEALNL WARARYRSRS EALGRSAGLQ SHLIVDLGLD YRLRDGVTGT LGIYNAADVV PDENAVDGRR LHIGLGTSF
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