Gene Pden_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1545 
Symbol 
ID4581292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1520277 
End bp1520594 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID639768860 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_915341 
Protein GI119384285 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.718681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0365604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA TCGATCTTAA CGCCTTGTCG CTCGCCGAGT TGAAGCAACT GGAAAAGAAT 
GTTGCGAAGG CCATCGCCAG TTTCGAGAAC CGTCGCAAGG CCGAGGCCCG CGCCAAGGTT
GACGAATTGG CCCGCGAACT CGGTTTCAGT TTCGACGAGC TTGCGGAAGC CGCTCCCACC
CGGAAACGCA CGGCGTCTGC GCCCAAGTAC CGCCACCCGG AAAACGCCGA AATCACCTGG
TCCGGTCGTG GGCGCAAACC GGCATGGATC GCCGAGGCGC TGGCTTCGGG AAAATCGCTC
GAGGATTTTG CGATCTGA
 
Protein sequence
MTDIDLNALS LAELKQLEKN VAKAIASFEN RRKAEARAKV DELARELGFS FDELAEAAPT 
RKRTASAPKY RHPENAEITW SGRGRKPAWI AEALASGKSL EDFAI