| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0877 |
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| Symbol | |
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| ID | 4579273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 862908 |
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| End bp | 864815 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768197 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_914684 |
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| Protein GI | 119383628 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0924516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACA ACAACCGCAA CCTCATCCTG GCGATGGTGC TTTCCGCCCT CGTCATGCTC
GTCTGGTCGA TCTTCTTCGC CCCCGAGCCG GTGCCGCCCG CGCAGGATAC GCCAGCGGCC
AGCACCCAGG GCACGGCCCA GCCCGAGGCC GGCGGTCCTG CGACGCCGGG TGCGGTGCCG
CAAGGCGCGG CGCCGGAGCT GGAGGCAGCG GCGGCCAGCA GCGATCCCTC GGCCAATGCC
GGGCGGGTGG CGATCGAATC CTCCTCGCTT GCGGGCACGA TCTCGCTTGC GGGCGGTCGC
ATCGACGATC TTGAACTGAC CGGCTACCGC GAGACGTTGG ATACCAGGTC GCCCTTCGTG
CGCCTGCTGT CGCCGACCGC GCAAACCACC GTGCAGGCCG AGGGCAGCCC GGTGGCGCCG
GGCGGCGGTG CGGAACTTGC GGTGCAGAAA CCCTATTACG CGGTCTATGG CTGGATGCCG
GCGGCCGGCA CCGATCCGGC GCTGGTTCCC GGCCCGGCTA CGGTGTGGGA GGTCGAATCC
GGCGCGAAGC TCGGCCCCGG CCAGCCGGTC ACGTTGCGCT GGGACAACGG CGCCGGGCAG
ATCTTCCGCC GCACCTATGA GCTGGACGAC AAGTTCCTGT TCACCGTGAC CCAGACGCTG
GAGAATACCG GGACCGCGCC CTTCTCGGCG GCGCCCTACG GCATCCTGGC GCGTCACGGC
AAGCCCGACA CCCAGAACTT CTTCGTCCTG CACGAGGGCG CAGTCGGCAT GACCGACGGC
AAGCTCTTGG AAAAGAAATA CAAGGACATG ACCAAGCTCG ACCCGCTGCC GGGCGAGGGG
CCTGCCGAGC TGGTCGAGGT GCAGGAGAAC GGCTGGATCG GCTTTACCGA CAAGTACTGG
ATGACCACCC TGGCACCCGC GCCTGGCCAG TCCTTTACCG CGGTGGCGAA ATACGCCCCC
GGCGCCGACA TCTACCAGAC CGAGGCGCGG ATGCCGGTGC AGACCGTCGC CCCCGGCGCG
ACCGGCACCA GCTCCAGCTA TCTTTTCGCC GGCGCCAAGG TCTGGGAGGT CATCAACGGC
TATCAGACCA ATCCCGGCAT CGACCGTTTC GTCGATTCCA TCGACTGGGG CTGGTTCTAC
TTCCTGACCA AGCCGATCTT CCGCCTGCTG CACTGGCTGC ATGGCATGAT CGGCAACATG
GGCTGGGCGA TCATCGCGCT GACCTTCGTG CTGAAGCTGC TGGTCTTCCC GCTGGCGCGC
AAATCCTACA TCTCGATGGC GAAGATGAAG GAGCTGCAAC CGCAGATGGA GGCGATCAAG
GAACGCACCG GCGACGACCG GATGAAGTTC CAGAAAGAGG TGATGGAGCT TTACAAGCGC
GAAAAGGTGA ACCCCGCCGC GGGCTGCCTG CCGGTGCTGC TGCAAATCCC GATCTTCTTT
GCGCTCTACA AGGTGATCTT CGTCACCATC GAGTTGCGCC ACGCGCCCTG GATCGGCTGG
ATTCGCGACC TTGCGGCGCC CGATCCGTCG AGCCTGTGGA ACCTGTTCGG CCTGCTGCCC
TGGGCGGCGC CGGGCCAGGG CAGCTTCCTG CACAGCTTTA CCCTGCCGGT GCTGGCGATC
CTGCTGGGCG TTTCGATGTG GATGCAGCAA AAGCTGAACC CGGCCCCCAC CGATCCGGCG
CAGAAGATGA TCTTCGCCTG GATGCCCTGG GTGTTCATGT TCATGCTGGG CGGCTTTGCC
TCGGGGCTGG TGCTTTACTG GATCACCAAC AACACCATCA CCATCATCCA GCAGTATACG
ATCATGTCGA TGCACGGCCA CCGGCCGGAC TTCTTCGGCA ATATCCGCTC CAGCCTGCCC
TCGCGGGCCA AGGCAGGGGA CAAGGGCGGG GACAAGGGCG GCAAATGA
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| Protein sequence | MQDNNRNLIL AMVLSALVML VWSIFFAPEP VPPAQDTPAA STQGTAQPEA GGPATPGAVP
QGAAPELEAA AASSDPSANA GRVAIESSSL AGTISLAGGR IDDLELTGYR ETLDTRSPFV
RLLSPTAQTT VQAEGSPVAP GGGAELAVQK PYYAVYGWMP AAGTDPALVP GPATVWEVES
GAKLGPGQPV TLRWDNGAGQ IFRRTYELDD KFLFTVTQTL ENTGTAPFSA APYGILARHG
KPDTQNFFVL HEGAVGMTDG KLLEKKYKDM TKLDPLPGEG PAELVEVQEN GWIGFTDKYW
MTTLAPAPGQ SFTAVAKYAP GADIYQTEAR MPVQTVAPGA TGTSSSYLFA GAKVWEVING
YQTNPGIDRF VDSIDWGWFY FLTKPIFRLL HWLHGMIGNM GWAIIALTFV LKLLVFPLAR
KSYISMAKMK ELQPQMEAIK ERTGDDRMKF QKEVMELYKR EKVNPAAGCL PVLLQIPIFF
ALYKVIFVTI ELRHAPWIGW IRDLAAPDPS SLWNLFGLLP WAAPGQGSFL HSFTLPVLAI
LLGVSMWMQQ KLNPAPTDPA QKMIFAWMPW VFMFMLGGFA SGLVLYWITN NTITIIQQYT
IMSMHGHRPD FFGNIRSSLP SRAKAGDKGG DKGGK
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