| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0396 |
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| Symbol | |
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| ID | 4578683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 365939 |
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| End bp | 367201 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639767713 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_914206 |
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| Protein GI | 119383150 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.342498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.976155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATC TGAAGCCCCC GGTTTTCGCG ACCCTCGGCT GTCGGCTGAA CGCCTATGAG
ACCGAGGCCA TGCGCGAGAT GGCCGAGGCC GCCGGGCTGC AAGGCGCGGT GATCGTGAAC
ACCTGCGCGG TGACGGCCGA GGCGGTGCGC AAGGCCCGGC AGGAGATCCG CCGGCTGGCG
CGCGAGAATC CGGGCGCCCC GGTCATCGTC ACCGGCTGCG CGGCGCAAAC CGAGCCCGAG
ACATTCGCCG CCATGGCCGA GGTCAGCCGC GTGATCGGCA ACCACGAGAA GATGCAGCCC
GCGACCTGGG CCGCGATGCA GGCCCCCGAC CTGATCGGCG AGACCGAGAA GGTGCAGGTC
GACGACATCA TGTCGGTCAA GGAAACCGCC GGGCACCTGA TCGACGGTTT CGGCCGGCAT
CGCGCCTATG TGCAGGTGCA GAACGGTTGC GATCATCGCT GCACCTTCTG CATCATCCCC
TACGGCCGCG GCAATTCGCG CTCGGTGCCG GCGGGGGTCG TGGTCGATCA GATCAAGCGG
CTGCGGGACC GCGGCTTCAA CGAGGTGGTG CTGACCGGGG TGGACCTGAC CTCCTGGGGG
GCCGACCTGC CGGGGCAGCC GCGGTTGGGC GACCTGGTCA TGCGCATCCT GCGGCTGGTG
CCGGACCTGC CGCGGCTGCG GATCAGCTCG ATCGATTCGA TCGAGGCCGA CGAGAACCTG
ATGCTGGCCA TCGCCACCGA GCCCCGGCTG ATGCCGCATC TGCACCTGTC CCTGCAGGCG
GGCGACGACA TGATCCTGAA GCGGATGAAG CGCCGCCACC TGCGCGACGA CGCCATCCGG
TTCTGCGAAG AGGCGCGGCG GCTGCGTCCC GGCATCGCCT TCGGCGCCGA CATCATCGCC
GGCTTCCCGA CCGAGACCGA GGCGATGTTC GAGAACAGCC TGAAGCTGGT CGAGGATTGC
GGGCTGACCT TCCTGCATGT GTTTCCCTAT TCGGCGCGGA AGGGCACCCC GGCGGCGCGG
ATGCCGCGCG TGCCCGGCCC GGCGATCAAG GAGCGCGCGG CCCGGCTGCG GGCGGCGGGC
GATGCGGCGC TGGCCCGGCA TTTGCAGGCC CAGCTCGGCG AGGCGCGCAT GGTGTTGACC
GAGGGGCCGC GCCTGGGCCG GACGGAGCAT TTCACCGAGG TCGCCTTCGA CCGCGACATG
CCCGAGGGCA CGCTGATGGC GTTGCGCATC GCGGGCCATG ACGGACAGCG GCTGACGGTC
TGA
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| Protein sequence | MKDLKPPVFA TLGCRLNAYE TEAMREMAEA AGLQGAVIVN TCAVTAEAVR KARQEIRRLA
RENPGAPVIV TGCAAQTEPE TFAAMAEVSR VIGNHEKMQP ATWAAMQAPD LIGETEKVQV
DDIMSVKETA GHLIDGFGRH RAYVQVQNGC DHRCTFCIIP YGRGNSRSVP AGVVVDQIKR
LRDRGFNEVV LTGVDLTSWG ADLPGQPRLG DLVMRILRLV PDLPRLRISS IDSIEADENL
MLAIATEPRL MPHLHLSLQA GDDMILKRMK RRHLRDDAIR FCEEARRLRP GIAFGADIIA
GFPTETEAMF ENSLKLVEDC GLTFLHVFPY SARKGTPAAR MPRVPGPAIK ERAARLRAAG
DAALARHLQA QLGEARMVLT EGPRLGRTEH FTEVAFDRDM PEGTLMALRI AGHDGQRLTV
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