Gene Pden_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0056 
Symbol 
ID4579087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp48847 
End bp49710 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content70% 
IMG OID639767368 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_913869 
Protein GI119382813 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.4135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGG AAGAGCCGAC TTTCGATCTG ATGCGGCCGC AACGGTGGCT GGGCGGGGTG 
ATCTTTGCCT CGCCGCATTC GGGGCGGGCC TATCCCGACT GGTTCCTGGC CGAATCGCGG
CTGAATGCGC AGCAGCTGCG CTCGTCCGAG GATGCCTTCG TGGACCGGCT GATCCAGCCG
GCGCTGGACC ATGGCGCCAC GATGCTGACC GCGCGGGTGC CGCGCTGCGT GGTGGACCTG
AACCGCGGCC CCGAAGAGAT CGACCCGCTG GTCGTCTCGG GGGCGCCGCC GGGATTGACC
AATCCGCGCA TCATGGCCGG GCTGGGGGTG ATTCCCCGCG TCGTGTCGCA GGGGCGCGCC
ATCCACGACC GGCCGATCCC GCGGACCGAG GCCGAAAGCC GCATCGCCCG CCTGTGGCAT
CCCTATCACC GGGCGCTTTC CGCGCTGATC GACGAGGCGG TGGCGCGATT CGGCGGCGCC
ATCCTGATCG ACATGCACTC CATGCCGCGC GACGCGCTGG CCCATCTGCC GCGCCCGCGT
CCCGACATGG TGCTGGGGGA TCGCAACGGG GTCTCGGCCG CTCCCCGGAT CAGCGCCGGC
GTGGCCGATG CCGTGGTGGC CGAGGGCTTT CGGCTGCGGC GCAACTCGCC CTTTTCGGGC
GCCTATATCA CCCAGACCTA TGGCCGGCCG CGCAACAATG TCCATGTGGT GCAACTGGAA
CTGGACCGCT CGCTTTACAT GGACGAGGGG CGGATCGAGC CGAGGGCGGA TTTCGAGCTG
TTCCAGGCCC GTTTCGCCCG CGTCATCACG CGGCTGGCGC GGCTGCGCCC GGACGCCAGC
GATGCGGCCT TCGCCGCCGA GTGA
 
Protein sequence
MTREEPTFDL MRPQRWLGGV IFASPHSGRA YPDWFLAESR LNAQQLRSSE DAFVDRLIQP 
ALDHGATMLT ARVPRCVVDL NRGPEEIDPL VVSGAPPGLT NPRIMAGLGV IPRVVSQGRA
IHDRPIPRTE AESRIARLWH PYHRALSALI DEAVARFGGA ILIDMHSMPR DALAHLPRPR
PDMVLGDRNG VSAAPRISAG VADAVVAEGF RLRRNSPFSG AYITQTYGRP RNNVHVVQLE
LDRSLYMDEG RIEPRADFEL FQARFARVIT RLARLRPDAS DAAFAAE