Gene Pden_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0006 
Symbol 
ID4578547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp5731 
End bp6507 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID639767317 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_913819 
Protein GI119382763 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA CACGCATCAT TGCTGTTGCA AACCAGAAGG GTGGGGTCGG AAAGACTACC 
ACGGCAATCA ATCTTGGCGC GGCCTTGGCC GAACAAGGTC AGCGCGTCGC TATCATTGAC
CTTGACCCGC AGGGCAATGC CTCCACTGGT TTGGGCGTGC CGTTGGAAGA ACGCGAGCTG
ACGTCCTATG ACCTGCTGAC CGGGGAGCGC GCATTGCAGG AAACGCTGCG CGACACGGCG
ATTGCCAATC TCCGCGTCGT GCCGTCGAAC CGCGACCTTG CCTCGGCGGA TTTTGAGCTC
TCCAACCGGC CCGGTCGGAC CCAGCTTTTG CGCCGGAAAC TGTCGGCTCC TTCGGAATTC
GACTATATTC TGATCGATTG TCCGCCGGCG CTTGGCCTTC TTACGGTGAA CGCCATGGTG
GCGTCTGACA GCGTCCTGGT GCCGCTGCAA GCCGAGTTTT ATGCGCTGGA GGGGCTTTCG
CAGCTGTTGA TGACGGTGCG CGAGGTGCGG CAAACCGCAA ATCCCGATTT GCGCATCGAG
GGCGTGCTGC TGACCATGTC CGACAATCGT AACAACCTGT CTCAGCAAGT CGAGGCGGAT
GCGCGCAGCA CGCTTTCCGG CCTGGTCTAT CGCACGGTGA TTCCGCGCAA TGTGCGGCTG
TCCGAGGCGC CATCGCATGC CATGCCGGTG CTGCAATATG ATCCGAACTC CAAGGGAAGC
CACGCCTATC GCGATCTGGC AAGGGAGTTC CTGTCCCGTC AACTCGCGAC CGCCTGA
 
Protein sequence
MPDTRIIAVA NQKGGVGKTT TAINLGAALA EQGQRVAIID LDPQGNASTG LGVPLEEREL 
TSYDLLTGER ALQETLRDTA IANLRVVPSN RDLASADFEL SNRPGRTQLL RRKLSAPSEF
DYILIDCPPA LGLLTVNAMV ASDSVLVPLQ AEFYALEGLS QLLMTVREVR QTANPDLRIE
GVLLTMSDNR NNLSQQVEAD ARSTLSGLVY RTVIPRNVRL SEAPSHAMPV LQYDPNSKGS
HAYRDLAREF LSRQLATA