Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2569 |
Symbol | |
ID | 4572397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2780961 |
End bp | 2782193 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639756618 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_902231 |
Protein GI | 118580981 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCC TGCACACATC GGACTGGCAC ATCGGCCGCG CCCTGTACGG CCGCAAACGC TACGAAGAGT TCGAGCTCTT TCTCGACTGG CTGACAACCT GCATCCAGAG CGAGCAGATC GAGGCGTTGC TGGTGGCGGG AGACGTGTTC GACAACGGCA CCCCCAGCAA CCGGGCGCTG GAGTTGTACT ACCGCTTCCT CTGCCGCGCG GCCGGCGCTG GCTGCCGGCA GGTGGTGGTC ACGGCCGGCA ACCACGACTC CCCCTCGCTC CTCAATGCCC CCCGCGAACT GTTGCGCCAC CTGGACGTGC ATGTGGTCGG CTGCATGACC GAGACGGTCG AGGACGAGCT GGTTGTGGTG AAACAGGAGG ACGGCCAGCC CGGCCTGATC GTCTGCGCCG TCCCCTACCT GCGCGACCGG GACATCCGCA GGGCCGAGGC GGGAGAGACC TTCGAGGACA AGGGGCGCAA GCTGGTGGAG GGCATCGCCG ACCACTATTG CCGGGTGGCC GACGCTGCCG CTGCCCTGAA CGCCCGGCTG GGGGGCAACA TCCCCATCGT CGCCATGGGG CACCTCTTCA CCAGCGGCGG CACAACCCTG GAGGGGGACG GCGTGCGCGA ACTGTATGTG GGGAACCTGG GTCAGGTGAC CAGCGATCTT TTACCCGACA GTTTTCGCTA CCTGGCCCTG GGCCACCTGC ATGTGGCCCA GCGGGTGAAT GGTTCGAGCA CTCGGCGCTA CTGCGGCTCC CCCCTGCCCA TGAGCTTCGG CGAGGCAAAT CAGCGCAAGC TGGTCCTGGC TGTCGAACTG GACGCAGCGG GGCTCAGGGT GGATGAGCTC CCAGTCCCCT GTTTTCAGCA GCTGGCCACG CTGCGCGGGG ACTGGGATCA CATCAGCCGG CGGATCCAGG AGCTGAAGCG GGAGTCCGCC GCCATCTGGC TGGAGGTCGT CTACGAAGGG GGCGAGATCG TGGGCGACCT GCAGGAGCGG CTGCGTGAGC TTGTGGAGGG GACATCCCTG GAGATCCTGC GCACCAGGAA CATGCGCTTG GTGGATCAGG CCCTGAGCGC CATGGCAACC GAGGAGACCC TGGACGACCT GAGCGTGGAC GACGTGTTCG CCCGCTGCCT GGACGCCCAT GGGGTGCCAG ACGAACAGCG CCCCGACCTG GCCGCACTCT TCGCCGAGAC CATGGCCGCG CTGCACGAGG ACGACAGCAG GGGGGCCCCA TGA
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Protein sequence | MKILHTSDWH IGRALYGRKR YEEFELFLDW LTTCIQSEQI EALLVAGDVF DNGTPSNRAL ELYYRFLCRA AGAGCRQVVV TAGNHDSPSL LNAPRELLRH LDVHVVGCMT ETVEDELVVV KQEDGQPGLI VCAVPYLRDR DIRRAEAGET FEDKGRKLVE GIADHYCRVA DAAAALNARL GGNIPIVAMG HLFTSGGTTL EGDGVRELYV GNLGQVTSDL LPDSFRYLAL GHLHVAQRVN GSSTRRYCGS PLPMSFGEAN QRKLVLAVEL DAAGLRVDEL PVPCFQQLAT LRGDWDHISR RIQELKRESA AIWLEVVYEG GEIVGDLQER LRELVEGTSL EILRTRNMRL VDQALSAMAT EETLDDLSVD DVFARCLDAH GVPDEQRPDL AALFAETMAA LHEDDSRGAP
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