| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2475 |
|---|
| Symbol | |
|---|
| ID | 4573997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2678810 |
|---|
| End bp | 2679661 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639756525 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_902138 |
|---|
| Protein GI | 118580888 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.169122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGA TACCGCTGTT TCTGATGCTG CTGCTGGCGC TTCCGCTCTC CTGCCACGCC
GCGGATTACG TGATCGGCGA GGGGGATGGA CTGGATGTTG CTGTCTGGGG CGTCAAGGAA
CTGACCTTTT CGGTCAGGGT CCGTCCGGAT GGTAAGATCA CCGTGCCCGG CCTGGGTGAC
CTTTCCGCCA GCGGGCAGAC ACCGACCGAG CTGCAGAAAA GCCTGACGGA AAAGCTTAAG
GATCTGGTGA AGAACCCGAT AGTAACCGTA ACCGTGCGCG AGATAACCAA CAGCAAGGTG
TATATTTTCG GGAGTGGAAT AAATTCAGGG GTATACGATC TCAACCGGCG CACCTCACTC
TTGCAGCTCC TCTGCTCCAT CGGCAGCCAG GCCTCCGTGG ATTCCACGTC AGCGGCGGGT
TCAGCGGGTG GAGCCACCTC GAAAGTAGCC GATTACAAGC GCGCCTATGT GCTGCGTAAC
GGCAAAAAGA TCAAGGAAAA CTTCTACCGC CTGTTCATCG ACGGCGACAC CTCTGAAGAT
GTGATCATCG AATCCAATGA CTCCATTTTC GTTCCCCAGC TCCTGGACCG GAATATTTAT
GTTCTCGGCG CGGTGGCAAC GCCGCGCGCC CTCGAATACC GCGAGGGGAT CAAGGTGATG
GAGGCGATTC TGGAGGCGGG TGGCTTCACC AAGTTCGCCG ATCAGAACGA CGTCATCATC
CGCAGGAAAG AGGGGACAAA GGATGTGGCC CTCGAGGTGA AGGCAAAGAA ACTGATCAAG
GATGGCGACC TGACCCAGAA CGTGCCTCTT CGGCCGGGAG ACTACGTCGT GGTCAGGGAG
AGCATCTTCT GA
|
|---|
| Protein sequence | MRLIPLFLML LLALPLSCHA ADYVIGEGDG LDVAVWGVKE LTFSVRVRPD GKITVPGLGD
LSASGQTPTE LQKSLTEKLK DLVKNPIVTV TVREITNSKV YIFGSGINSG VYDLNRRTSL
LQLLCSIGSQ ASVDSTSAAG SAGGATSKVA DYKRAYVLRN GKKIKENFYR LFIDGDTSED
VIIESNDSIF VPQLLDRNIY VLGAVATPRA LEYREGIKVM EAILEAGGFT KFADQNDVII
RRKEGTKDVA LEVKAKKLIK DGDLTQNVPL RPGDYVVVRE SIF
|
|---|
| |