Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2231 |
Symbol | |
ID | 4575025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2406015 |
End bp | 2406812 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639756279 |
Product | TPR repeat-containing protein |
Protein accession | YP_901896 |
Protein GI | 118580646 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000660918 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGAAG TAAAACCGGC TGATGCCATC ATCGAGGGGA TCAACCTGCT GGAGTCGGGA GATGCGCGCG GAGCGCGCAC GGTGCTTGAG GCGTATACCA GCAACCATCG CGACAACCCC GACGGCTTCT TTTATCTGGG AGATGCCCTG GCCGAGGATG GCCATATCGA CAAGGCCATT GTCGCCTACC GCGAGGGGTT GGCCATCGCC CCCGACGATA CCGATGCCCT GACGACCCTG GGCGACCTGC TGTTCGAGTC CGGACAGCAC GAGGCGGCCA TTGCCAGCTA TACCAGGGTG CGGGAGCTTG AACCGGGCGA CATGGACGTT CTGGTCAGCA TCGGGCTGGT CTACTCGAGC CTGGACCGCG GCGACGAGGC CATCGCCTGC TTCCGCCAGG CATTGGAGAG CGATCCCCGC AACGTGTTCG CCTGGAATGC CCTCGGTGAC GCCCTCTACG GCGGGGACGA CGTGCAGGGT GCCGTTGATG CCTACCGCAA GGGGGTCGAG ATCGATCCGG ATGATCCGGC GGCGCACTTC AATCTGGGGG AGCTCTACTA TGACATGGAT GAACTGGAAG AGGCCGAGCA GGAATGCTGC CAGGCGGTCA GGCTGGACCC CTGCTTCAGC ATGGCCTATC TGACCCTGGG CAGCATCTGC ATGGACCAGG AGCGGCTTGA AGATGCGGTG CGCTATTTCC AGCGCTACCT GGAGTACGAG AAGTCCCCCA GTGCCTCCGA GATGGTCGCC GAGGTCAAGG CGGTGATCGA GGGGCTGAAA GAGGAACTGA AGGGGTAA
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Protein sequence | MCEVKPADAI IEGINLLESG DARGARTVLE AYTSNHRDNP DGFFYLGDAL AEDGHIDKAI VAYREGLAIA PDDTDALTTL GDLLFESGQH EAAIASYTRV RELEPGDMDV LVSIGLVYSS LDRGDEAIAC FRQALESDPR NVFAWNALGD ALYGGDDVQG AVDAYRKGVE IDPDDPAAHF NLGELYYDMD ELEEAEQECC QAVRLDPCFS MAYLTLGSIC MDQERLEDAV RYFQRYLEYE KSPSASEMVA EVKAVIEGLK EELKG
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